DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and AT2G21430

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_565512.1 Gene:AT2G21430 / 816682 AraportID:AT2G21430 Length:361 Species:Arabidopsis thaliana


Alignment Length:253 Identity:77/253 - (30%)
Similarity:116/253 - (45%) Gaps:47/253 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 PTDGLPSSFNALDKWSSYISEVPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQLSAQNILSCT 247
            ||..||..|:..|:.:  ::.|.:||.||:.|..|||. |.:.....:.|| .|.||.|.::.|.
plant   128 PTQNLPEEFDWRDRGA--VTPVKNQGSCGSCWSFSTTG-ALEGAHFLATGK-LVSLSEQQLVDCD 188

  Fly   248 RR---------QQGCEGGHLDAAWRY-LHKKGVVDENCYPYT-QHRDTCKIRHNSRSLRANGCQK 301
            ..         ..||.||.:::|:.| |...|::.|..|||| ....:||:              
plant   189 HECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKL-------------- 239

  Fly   302 PVNVDRDSLYTVGPAYSL--NREADIMAEIFHSGPVQATMRVNRDFF-AYSGGVYRETAANRKAP 363
                ||..:......:|:  ..|..|.|.:..:||:  .:.:|..:. .|.|||......:|:..
plant   240 ----DRSKIVASVSNFSVVSINEDQIAANLIKNGPL--AVAINAAYMQTYIGGVSCPYICSRRLN 298

  Fly   364 TGFHSVKLVGWG-----EEHNGEK-YWIAANSWGSWWGEHGYFRILRGSNECGIEEYV 415
               |.|.|||:|     :....|| |||..||||..|||:|:::|.:|.|.||::..|
plant   299 ---HGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLV 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 74/248 (30%)
AT2G21430NP_565512.1 Inhibitor_I29 48..103 CDD:214853
Peptidase_C1 132..356 CDD:425470 75/249 (30%)
Blue background indicates that the domain is not in the aligned region.

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