Protein Alignment Swim and Ctss

DIOPT Version :10

• Sequence 1: NP_611652.2
• Gene: Swim / 37537
• FlyBaseID: FBgn0034709
• Length: 431
• Species: Drosophila melanogaster
• Sequence 2: XP_063138486.1
• Gene: Ctss / 50654
• RGDID: 621513
• Length: 342
• Species: Rattus norvegicus
• Alignment Length: 314
• Identity: 85/314 - (27%)
• Similarity: 136/314 - (43%)
• Gaps: 64/314 - (20%)

  Fly   132 IVHSVNSIHRLGWSARKYDQWWGRKYSEGLKLRLGTKEPTYRVKAMTRLKNP------------- 183
            ::|::.  |.:|.          ..||.|:. .:|...|...:..|..|:.|
  Rat    70 MLHNLE--HSMGM----------HSYSVGMN-HMGDMTPEEVIGYMGSLRIPRHWNRSGTLKSSS 121

  Fly   184 TDGLPSSFNALDKWSSYISEVPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQLSAQNILSCTR 248
            ...||.|.:..:|  ..::.|..||.||:.|..|.......:..::: || .|.|||||::.|:.
  Rat   122 NQTLPDSVDWREK--GCVTNVKYQGSCGSCWAFSAVGALEGQLKLKT-GK-LVSLSAQNLVDCST 182

  Fly   249 RQ----QGCEGGHLDAAWRYLHKKGVVD-ENCYPYTQHRDTCKIRHNSRSLRANGCQKPVNV--- 305
            .:    :||.||.:..|::|:...|.:| |..|||....:.|   |.....||..|.:.:.:
  Rat   183 EEKYGNKGCGGGFMTEAFQYIIDNGGIDSEASYPYKAMDEKC---HYDPKNRAATCSRYIELPFG 244

  Fly   306 DRDSLYTVGPAYSLNREADIMAEIFHSGPVQATMRVNR-DFFAYSGGVYRETAANRKAPTGFHSV 369
            |.::|          :||     :...|||...:..:. .||.|..|||.:.:......   |.|
  Rat   245 DEEAL----------KEA-----VATKGPVSVGIDASHSSFFLYQSGVYDDPSCTENVN---HGV 291

  Fly   370 KLVGWGEEHNGEKYWIAANSWGSWWGEHGYFRILRGS-NECGIEEYVLASWPYV 422
            .:||:| ..:|:.||:..||||..:|:.||.|:.|.: |.|||..|  .|:|.:
  Rat   292 LVVGYG-TLDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASY--CSYPEI 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Swim	NP_611652.2	Somatomedin_B	41..84	CDD:460034
		Peptidase_C1A_CathepsinB	188..417	CDD:239111	71/238 (30%)
Ctss	XP_063138486.1	None