DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and BC051665

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_954599.2 Gene:BC051665 / 218275 MGIID:2682300 Length:330 Species:Mus musculus


Alignment Length:257 Identity:81/257 - (31%)
Similarity:119/257 - (46%) Gaps:36/257 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 KAMTRLKNPTDG-LPSSFNALDKWSSYISEVPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQL 238
            |.||..:.|..| :|.|.:..|  ..|::.|.|||.||:.|..|  :|.|....|..|..:.|.|
Mouse   101 KEMTIFQEPLLGDVPKSVDWRD--HGYVTPVKDQGHCGSCWAFS--AVGSLEGQIFRKTGKLVPL 161

  Fly   239 SAQNILSC--TRRQQGCEGGHLDAAWRYL-HKKGVVDENCYPYTQHRDTCKIRHNSRSLRANGCQ 300
            |.||::.|  :....||.||.::.|::|: ..:|:.....|.|......|:......::...|..
Mouse   162 SEQNLMDCSWSYGNVGCNGGLMELAFQYVKENRGLDTRESYAYEAWDGPCRYDPKYSAVNITGFV 226

  Fly   301 KPVNVDRDSLYTVGPAYSLNREADIMAEIFHSGPVQATMRVNRDFFA-YSGGVYRE---TAANRK 361
            | |.:..|:|        :|..|.:       |||...:..:...|. |.||.|.|   ::.|..
Mouse   227 K-VPLSEDAL--------MNAVASV-------GPVSVGIDTHHHSFRFYRGGTYYEPDCSSTNLD 275

  Fly   362 APTGFHSVKLVGWGEEHNGEKYWIAANSWGSWWGEHGYFRILRG-SNECGIEEYVLASWPYV 422
                 |:|.:||:|||.:|.|||:..||||..||..||.::.:. .|.|||..|  |.:|.|
Mouse   276 -----HAVLVVGYGEESDGRKYWLVKNSWGEDWGMDGYIKMAKDRDNNCGIATY--AIYPTV 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 73/236 (31%)
BC051665NP_954599.2 Inhibitor_I29 29..87 CDD:214853
Peptidase_C1 114..329 CDD:425470 74/241 (31%)
Blue background indicates that the domain is not in the aligned region.

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