DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and Y113G7B.15

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_507904.2 Gene:Y113G7B.15 / 190976 WormBaseID:WBGene00013764 Length:362 Species:Caenorhabditis elegans


Alignment Length:250 Identity:75/250 - (30%)
Similarity:110/250 - (44%) Gaps:32/250 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 RLKNPTDGLPSSFNALDKW---SSYISEVPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQLSA 240
            |.|..:..:|..|:..|.:   |..:..|.||..||..|..:||::......:.|  |....||.
 Worm   123 RSKRQSGDIPDYFDLRDIYVDGSPVVGPVKDQEQCGCCWAFATTAITEAANTLYS--KSFTSLSD 185

  Fly   241 QNILSC--TRRQQGCEGGHLDAAWRYLHKKGVVDENCYPYTQHRDTCKIRHNSRSLRAN------ 297
            |.|..|  :....||.||......:.:|.:|...:..|||.::             |||      
 Worm   186 QEICDCADSGDTPGCVGGDPRNGLKMVHLRGQSSDGDYPYEEY-------------RANTTGNCV 237

  Fly   298 GCQKPVNVDRDSL--YTVGPAYSLNREADIMAEIF-HSGPVQATMRVNRDFFAYSGGVYRETAAN 359
            |.:|...:..::|  |.....|:   |.|||..:: :..|.....||..:|..|:.||.:.....
 Worm   238 GDEKSTVIQPETLNVYRFDQDYA---EEDIMENLYLNHIPTAVYFRVGENFEWYTSGVLQSEDCY 299

  Fly   360 RKAPTGFHSVKLVGWGEEHNGEKYWIAANSWGSWWGEHGYFRILRGSNECGIEEY 414
            :..|..:|||.:||:|...:|..||:..|||.|.||.|||.:|.||.|.|.||.:
 Worm   300 QMTPAEWHSVAIVGYGTSDDGVPYWLVRNSWNSDWGLHGYVKIRRGVNWCLIESH 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 73/240 (30%)
Y113G7B.15NP_507904.2 Inhibitor_I29 30..90 CDD:462410
Peptidase_C1A 132..358 CDD:239068 73/240 (30%)
Blue background indicates that the domain is not in the aligned region.

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