DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and tag-329

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_505458.1 Gene:tag-329 / 183677 WormBaseID:WBGene00008231 Length:374 Species:Caenorhabditis elegans


Alignment Length:306 Identity:79/306 - (25%)
Similarity:129/306 - (42%) Gaps:43/306 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 NSIHRLGWSARK--YDQWWG-RKYSE-------GLKLRLG-----TKEPTYRVKAMTRLKNPTDG 186
            |.:.::..:|:|  :|..:| .|:|:       |:..:.|     |..|.:.:|.: |:|...:|
 Worm    76 NRVGKMNKAAKKAGHDTKYGINKFSDLSKKEIHGMYSKFGPPKNNTNVPKFNLKNL-RVKRQMEG 139

  Fly   187 LPSSFNALDK--WSSY-ISEVPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQLSAQNILSCT- 247
            ||.:|:..:|  ...| |..:..|..|...|..:.|:||.....:..|...|  ||.|.:..|. 
 Worm   140 LPKTFDLRNKKVGGHYIIGPIKTQDSCACCWGFAATAVAEAALTVHLKKAMN--LSEQEVCDCAP 202

  Fly   248 RRQQGCEGGHLDAAWRYLHKKGVVDENCYPYTQHRDT----CKIRHNSRSLRANGCQKPVNVDRD 308
            :...||.||.......|:.:.|:.....||:..:|.|    |:.....|.|      .|:.:|  
 Worm   203 KHGPGCNGGDPVDGLEYIKEMGLTGGKEYPFNVNRSTQLGRCESEKYDREL------NPLELD-- 259

  Fly   309 SLYTVGPAYSLNREADIMAEIFHSG-PVQATMRVNRDFFAYSGGVYRETAANRKAPTGFHSVKLV 372
             .|.:.|   .|.|..:...::... |:....|......:|..|:......:.:....:||..:|
 Worm   260 -YYAIDP---FNAEYQMTHHLYLLNLPISVAFRTGASLSSYLSGILELADCDDEKGGHWHSGAIV 320

  Fly   373 GWGEEHNGE----KYWIAANSWGSWWGEHGYFRILRGSNECGIEEY 414
            |:|...|..    .|||..|||.:.||:.||.||:||.:.|.||.:
 Worm   321 GYGTTKNSAGRTVDYWIFRNSWWTDWGDDGYARIVRGEDWCSIESH 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 63/240 (26%)
tag-329NP_505458.1 Inhibitor_I29 47..106 CDD:214853 7/29 (24%)
Peptidase_C1A 141..368 CDD:239068 63/240 (26%)
Blue background indicates that the domain is not in the aligned region.

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