DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and CTSO

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001325.1 Gene:CTSO / 1519 HGNCID:2542 Length:321 Species:Homo sapiens


Alignment Length:259 Identity:75/259 - (28%)
Similarity:112/259 - (43%) Gaps:42/259 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 TKEPTYRVKAMTRLKNPTDGLPSSFNALDKWSSYISEVPDQGWCGASWVLSTTSVASDRFAIQSK 231
            :|.|.|  .|...:..|...||..|:..||  ..:::|.:|..||..|..|........:||  |
Human    90 SKFPRY--SAEVHMSIPNVSLPLRFDWRDK--QVVTQVRNQQMCGGCWAFSVVGAVESAYAI--K 148

  Fly   232 GKENVQLSAQNILSCTRRQQGCEGGHLDAAWRYLHKKGV--VDENCYPYTQHRDTCKI---RHNS 291
            ||....||.|.::.|:....||.||....|..:|:|..|  |.::.||:......|..   .|:.
Human   149 GKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSG 213

  Fly   292 RSLRANGCQKPVNVDRDSLYTVGPAYSLNREADIMAE-IFHSGP----VQATMRVNRDFFAYSGG 351
            .|::.              |:   ||..:.:.|.||: :...||    |.|.     .:..|.||
Human   214 FSIKG--------------YS---AYDFSDQEDEMAKALLTFGPLVVIVDAV-----SWQDYLGG 256

  Fly   352 VYRETAANRKAPTGFHSVKLVGWGEEHNGEKYWIAANSWGSWWGEHGYFRILRGSNECGIEEYV 415
            :.:...::.:|.   |:|.:.|: ::.....|||..|||||.||..||..:..|||.|||.:.|
Human   257 IIQHHCSSGEAN---HAVLITGF-DKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGIADSV 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 69/238 (29%)
CTSONP_001325.1 Inhibitor_I29 <37..80 CDD:462410
Peptidase_C1A 109..319 CDD:239068 69/238 (29%)
Blue background indicates that the domain is not in the aligned region.

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