DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and Swim

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_061500477.1 Gene:Swim / 1269545 VectorBaseID:AGAMI1_006202 Length:471 Species:Anopheles gambiae


Alignment Length:436 Identity:235/436 - (53%)
Similarity:298/436 - (68%) Gaps:20/436 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KCVHLVGLLVLLMG---GANALFDHTLKRDFPGPYC-ARENTCCKDRHDGCSVPISNTLCYCDEF 64
            |..||: |.:.|:|   |..:.|    :::|||||| ||.:.||:||.|||:.|||.||||||||
Mosquito     8 KMRHLL-LFLALVGFAVGQGSRF----RQEFPGPYCAARADRCCRDRQDGCAQPISTTLCYCDEF 67

  Fly    65 CDRDDSSDCCPDYRSFCIG---EVDPIISCEHNGVYFSKYNTTW-DNCNECRCLEGGSVQCDEDL 125
            |:|.:..||||||...|:|   |.:...||.:...||:.|:... ||||.|:|...|||.|.||:
Mosquito    68 CERGEHGDCCPDYEEVCMGIAPEPENATSCVYKNRYFTPYDQALVDNCNTCKCNMDGSVTCTEDV 132

  Fly   126 CLTDDAIVHSVNSIHR-LGWSARKYDQWWGRKYSEGLKLRLGTKEPTYRVKAMTRLKNPTDGLPS 189
            ||.||.::..::.:.| :||.|..|.:|||.||.||..|||||.:|.:|||||.||.|....|||
Mosquito   133 CLADDDLLRQLHHLERSIGWKATNYSEWWGHKYDEGKVLRLGTFQPRFRVKAMKRLSNKGGHLPS 197

  Fly   190 SFNALDKWSSYISEVPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQLSAQNILSCTRRQQGCE 254
            .|:|.:.|:..::|..||||||:||..||.::|||||||.|||:|.|||:.|.:|:|.||||||.
Mosquito   198 RFDASEHWTGLVAEARDQGWCGSSWAFSTATMASDRFAILSKGREMVQLAPQQMLACVRRQQGCS 262

  Fly   255 GGHLDAAWRYLHKKGVVDENCYPYTQHRDTCKIRHNSRSLRANGCQKPVNVDRDSLYTVGPAYSL 319
            |||||.||:||.:.|||:|.||||...::.|||.::...:.|| |:.||.|:|..:|.:|||:||
Mosquito   263 GGHLDTAWQYLRRTGVVNEECYPYIAAQNVCKISNDDTLITAN-CELPVKVNRTLMYKMGPAFSL 326

  Fly   320 NREADIMAEIFHSGPVQATMRVNRDFFAYSGGVYRETAANRKAP--TGFHSVKLVGWGEEHNG-- 380
            |.|.||||||...|.|||.|||.||||:|..|:||.:||...|.  :.:|||:|:|||||..|  
Mosquito   327 NNETDIMAEIKDRGTVQAIMRVYRDFFSYRSGIYRHSAAATPAEERSAYHSVRLIGWGEERVGYD 391

  Fly   381 -EKYWIAANSWGSWWGEHGYFRILRGSNECGIEEYVLASWPYVYSY 425
             .|||||.||||.||||:|.||||||||||.||.|||||.|||:.:
Mosquito   392 VVKYWIAINSWGQWWGENGRFRILRGSNECDIESYVLASNPYVHEH 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034 28/45 (62%)
Peptidase_C1A_CathepsinB 188..417 CDD:239111 136/233 (58%)
SwimXP_061500477.1 None

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