DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and zgc:174154

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001314908.1 Gene:zgc:174154 / 100537591 ZFINID:ZDB-GENE-071004-116 Length:335 Species:Danio rerio


Alignment Length:245 Identity:76/245 - (31%)
Similarity:115/245 - (46%) Gaps:33/245 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 PSSFNALDK--W--SSYISEVPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQLSAQNILSCTR 248
            ||.|.|..:  |  ..|::.|.||..||:.|..|:|.....:. .:..|| .:.:|.||::.|:|
Zfish   110 PSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQL-FRKTGK-LISMSEQNLVDCSR 172

  Fly   249 RQ--QGCEGGHLDAAWRYL-HKKGVVDENCYPYTQHRDTCKIRHNSRSLRANGCQKPVNVDRDSL 310
            .|  |||.||.:|.|::|: ..||:..|..|||.. ||....|::.|          .||.:.:.
Zfish   173 PQGNQGCNGGIMDQAFQYVKENKGLDSEQSYPYLA-RDDLPCRYDPR----------FNVAKITG 226

  Fly   311 YTVGPAYSLNREADIMAEIFHSGPVQATMRVNRDFFA-YSGGVYRETAANRKAPTGFHSVKLVGW 374
            :...|.   ..|..:|..:...|||...:..:..... |..|:|.|.|...:..   |:|.:||:
Zfish   227 FVDIPK---GNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACTSRLD---HAVLVVGY 285

  Fly   375 ---GEEHNGEKYWIAANSWGSWWGEHGYFRILRG-SNECGIEEYVLASWP 420
               |.:..|.:|||..|||...||:.||..:.:. :|.|||.  .:||:|
Zfish   286 GYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGIA--TMASYP 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 73/240 (30%)
zgc:174154NP_001314908.1 Inhibitor_I29 28..86 CDD:214853
Peptidase_C1 115..334 CDD:425470 73/240 (30%)
Blue background indicates that the domain is not in the aligned region.

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