DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and tinagl1

DIOPT Version :9

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_002938532.3 Gene:tinagl1 / 100124858 XenbaseID:XB-GENE-991634 Length:464 Species:Xenopus tropicalis


Alignment Length:450 Identity:190/450 - (42%)
Similarity:248/450 - (55%) Gaps:44/450 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LVGLLVLLMGG-----------ANALFDHTLKRDFPGPYCARENTCCKDRHDGCSVPISNTLCYC 61
            ||..||:...|           |..|..|.: ||..|.||.:.::||..|.|.|:||..:|:|||
 Frog     9 LVAFLVVTEAGSYRKSRSRRELAPGLHLHGI-RDASGSYCQKRDSCCPGRDDICTVPYLDTICYC 72

  Fly    62 DEFCDRDDSSDCCPDYRSFCIGEVDPII---SCEHNGVYFSKYNTTWDNCNECRCLEGGSVQCDE 123
            |.||:| ..||||||:..:|:|...|.|   :|..||.::.|..|..:|||.|.|...|...|::
 Frog    73 DLFCNR-TVSDCCPDFWQYCLGIEPPSIVQKACVRNGQHYPKGATYLENCNLCTCANEGRWHCEQ 136

  Fly   124 DLCLTDDAIVHSVNSIHRLGWSARKYDQWWGRKYSEGLKLRLGTKEPTYRVKAMTRL--KNPTDG 186
            :.||.:...:.::|: ....|:|..|.|:||....||::.||||.:|:..|..|..:  ....|.
 Frog   137 NPCLINAKAIEAINT-GDYSWTAGNYSQFWGMTLDEGIQYRLGTAKPSSSVMNMNEIHVNMNNDI 200

  Fly   187 LPSSFNALDKWSSYISEVPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQLSAQNILSC-TRRQ 250
            |||.|||.:||...:.|..|||.|..||..||.:|||||.:|||.|.....||.||:||| ||.|
 Frog   201 LPSHFNAAEKWPGLVHEPLDQGNCAGSWAFSTAAVASDRISIQSMGHMTQSLSPQNLLSCDTRNQ 265

  Fly   251 QGCEGGHLDAAWRYLHKKGVVDENCYPYTQ-----HRDTCKIRHNSRSL------RANGCQKPVN 304
            .||.||.:|.||.||.::|||.|.|||:|.     |...|.::  |||:      ..|.|.... 
 Frog   266 HGCRGGRVDGAWWYLRRRGVVSEPCYPFTSLNTNGHSAPCMMQ--SRSMGRGKRQATNNCPNQY- 327

  Fly   305 VDRDSLYTVGPAYSL-NREADIMAEIFHSGPVQATMRVNRDFFAYSGGVYRETAANRKAPT---- 364
            ...:.:|...|||.| :.|.|||.|::.:|||||.|.|:.|||.|..|:||.|....:.|.    
 Frog   328 YSSNEIYQSTPAYRLASSEKDIMKELYENGPVQAIMEVHEDFFMYKSGIYRRTPVTEREPEHHRR 392

  Fly   365 -GFHSVKLVGWGEEHNGE----KYWIAANSWGSWWGEHGYFRILRGSNECGIEEYVLASW 419
             |.||||:.|||||...:    |||:||||||..|||.|||||.||.|||.||.:::..|
 Frog   393 HGTHSVKITGWGEERGRDGQTHKYWLAANSWGRDWGEDGYFRIARGENECEIETFIVGVW 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..83 CDD:279385 22/41 (54%)
VWC 91..>126 CDD:302663 12/34 (35%)
Peptidase_C1A_CathepsinB 188..417 CDD:239111 119/250 (48%)
tinagl1XP_002938532.3 VWC_out 104..>139 CDD:214565 12/34 (35%)
Peptidase_C1A_CathepsinB 202..451 CDD:239111 119/251 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 225 1.000 Domainoid score I2485
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41472
Inparanoid 1 1.050 349 1.000 Inparanoid score I2240
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1436535at2759
OrthoFinder 1 1.000 - - FOG0007265
OrthoInspector 1 1.000 - - oto104173
Panther 1 1.100 - - LDO PTHR12411
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5102
SonicParanoid 1 1.000 - - X3555
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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