DRSC/TRiP Functional Genomics Resources

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Protein Alignment Swim and si:dkey-239j18.3

DIOPT Version :10

Sequence 1:NP_611652.2 Gene:Swim / 37537 FlyBaseID:FBgn0034709 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_001341714.2 Gene:si:dkey-239j18.3 / 100001785 ZFINID:ZDB-GENE-121214-39 Length:336 Species:Danio rerio


Alignment Length:245 Identity:75/245 - (30%)
Similarity:115/245 - (46%) Gaps:32/245 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 PSSFNALDK--W--SSYISEVPDQGWCGASWVLSTTSVASDRFAIQSKGKENVQLSAQNILSCTR 248
            ||.|.|..:  |  ..|::.|.||..||:.|..|:|.....:. .:..|| .:.:|.||::.|:|
Zfish   110 PSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSFSSTGALEGQL-FRKTGK-LISMSEQNLVDCSR 172

  Fly   249 RQ--QGCEGGHLDAAWRYL-HKKGVVDENCYPYTQHRDTCKIRHNSRSLRANGCQKPVNVDRDSL 310
            .|  |||.||.:|.|::|: ..||:..|..|||.. ||....|::.|          .||.:.:.
Zfish   173 PQGNQGCNGGLMDQAFQYVKENKGLDSEQSYPYLA-RDDLPCRYDPR----------FNVAKITG 226

  Fly   311 YTVGPAYSLNREADIMAEIFHSGPVQATMRVNRDFFA-YSGGVYRETAANRKAPTGFHSVKLVGW 374
            :...|:   ..|..:|..:...|||...:..:..... |..|:|.|.|.:.....  |:|.:||:
Zfish   227 FVDIPS---GNELALMNAVAAVGPVSVAIDASHQSLQFYQSGIYYERACSSSRLD--HAVLVVGY 286

  Fly   375 ---GEEHNGEKYWIAANSWGSWWGEHGYFRILRG-SNECGIEEYVLASWP 420
               |.:..|.:|||..|||...||:.||..:.:. :|.||:.  ..||:|
Zfish   287 GYQGADVAGNRYWIVKNSWSDKWGDKGYIYMAKDKNNHCGVA--TKASYP 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SwimNP_611652.2 Somatomedin_B 41..84 CDD:460034
Peptidase_C1A_CathepsinB 188..417 CDD:239111 72/240 (30%)
si:dkey-239j18.3XP_001341714.2 Inhibitor_I29 28..86 CDD:214853
Peptidase_C1 115..335 CDD:425470 72/240 (30%)
Blue background indicates that the domain is not in the aligned region.

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