DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11275 and RGD1560554

DIOPT Version :9

Sequence 1:NP_611649.1 Gene:CG11275 / 37534 FlyBaseID:FBgn0034706 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_038959853.1 Gene:RGD1560554 / 502576 RGDID:1560554 Length:364 Species:Rattus norvegicus


Alignment Length:180 Identity:53/180 - (29%)
Similarity:85/180 - (47%) Gaps:7/180 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GQLLRGAKYTDCVFHVCEEQVKCHKLILSSASPVFEAMFFGPMQNNEPEPEIEIHDISSAIFKVL 87
            |:|...:.:|||...|..::.:.||.||::.||||.|||...|..:... .||||||...:||.:
  Rat   179 GELWENSLFTDCSLVVAGQEFRAHKAILAARSPVFRAMFEHEMLESLTN-RIEIHDIHLQVFKEM 242

  Fly    88 VEYIYTGVVDYNGLELVACIELYYAAEKYLLEELIADTLMVITRKLRFANILPALELSVCMGLDG 152
            :.:||||...:.....:| .||..||:.|.|::|.......:.|.|.....:|.|.|:.....:.
  Rat   243 MAFIYTGKAPHLHSHSMA-TELLAAADMYDLQDLKVMCEDSLCRNLSVKTAVPTLILADLHSTEL 306

  Fly   153 LLEVCMTFFMRCC--VNNGQYMSHLKEHYVHVSKEC---VKAIIAACKEP 197
            |....|.|.:...  |:.......:.|.:.|:::|.   :.:|..:..||
  Rat   307 LKTRVMDFIILHASEVSETLEWKSMVESHPHLAEEAFLSLASIQCSSLEP 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11275NP_611649.1 BTB 22..122 CDD:279045 37/98 (38%)
BTB 33..122 CDD:197585 34/88 (39%)
RGD1560554XP_038959853.1 MATH 16..153 CDD:351761
BTB_POZ 165..292 CDD:365784 40/114 (35%)
BACK 287..352 CDD:421692 12/64 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24413
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X131
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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