DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11275 and LOC100911679

DIOPT Version :9

Sequence 1:	NP_611649.1	Gene:	CG11275 / 37534	FlyBaseID:	FBgn0034706	Length:	417	Species:	Drosophila melanogaster
Sequence 2:	XP_003749384.1	Gene:	LOC100911679 / 100911679	RGDID:	6491125	Length:	358	Species:	Rattus norvegicus

Alignment Length:	222	Identity:	63/222 - (28%)
Similarity:	96/222 - (43%)	Gaps:	41/222 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 KEPGSVSSGLGRRYGQLLRGAKYTDCVFHVCEEQVKCHKLILSSASPVFEAMFFGPMQNNEPEPE 73
            |:|..:   |....|:|...:.:|||...|..::.:.||.||:..||||.|||...||..... .
  Rat   168 KDPRQI---LADDVGELWENSLFTDCSLVVAGQEFRAHKAILAGHSPVFRAMFEHEMQERLTN-R 228

  Fly    74 IEIHDISSAIFKVLVEYIYTGVVDY-----NGLELVACIELYYAAEKYLLEELIADTLMVITRKL 133
            ||.|||...:||.::.:||||...:     ....|:|..::|...|   |:::..|:|   .|.|
  Rat   229 IEFHDIHLQVFKEMMAFIYTGKAPHLHSHSMATGLLAAADMYDLQE---LKDMCEDSL---CRNL 287

  Fly   134 RFANILPALELSVCMGLDGLLEVCMTFFMRCCVNNGQYMSHLKEHYVHVSK--ECV--KAIIAAC 194
            ...|.:|.|.|:.......|....|.|.:                 :|.|:  |.|  |:::.:
  Rat   288 SVKNAVPTLILADLHSTKHLKTRAMDFII-----------------LHASEVSETVGWKSMVES- 334

  Fly   195 KEPHKLLIWYVYEWTRQECEQLGLGPS 221
             .|| |:....|..:..:|.  ||.||
  Rat   335 -HPH-LVEEAFYSLSSIQCP--GLEPS 357

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11275	NP_611649.1	BTB	22..122	CDD:279045	35/104 (34%)
CG11275	NP_611649.1	BTB	33..122	CDD:197585	32/93 (34%)
LOC100911679	XP_003749384.1	MATH	16..153	CDD:295307
		BTB	180..284	CDD:279045	36/110 (33%)
		BTB	189..287	CDD:197585	35/104 (34%)
		SPOP_C	287..348	CDD:269807	17/80 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24413
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X131
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.010