DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxo42 and ESP

DIOPT Version :10

Sequence 1:NP_611647.1 Gene:Fbxo42 / 37532 FlyBaseID:FBgn0034704 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_175806.3 Gene:ESP / 841842 AraportID:AT1G54040 Length:341 Species:Arabidopsis thaliana


Alignment Length:274 Identity:62/274 - (22%)
Similarity:107/274 - (39%) Gaps:47/274 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PYGDLEHCSLVCKRWHAIVKNLV----RRSRHNLEKGLIDFR------LRWEVFSQQTVNGGAGA 95
            |.||....|.:..|..|:...:.    |....|.|    :||      ..|...::....||..|
plant    67 PKGDAPTVSCLGVRMVAVGTKIYIFGGRDENRNFE----NFRSYDTVTSEWTFLTKLDEVGGPEA 127

  Fly    96 LLSFIAGRFAHSAVRQDNSMYVFGGGS-----SSDTTFNDLWRFDLTHMRWARPVATGTYPSPKG 155
                   |..||....:|.:|||||.|     ::.|.|..:..:::...:||:....|.....:|
plant   128 -------RTFHSMASDENHVYVFGGVSKGGTMNTPTRFRTIEAYNIADGKWAQLPDPGDNFEKRG 185

  Fly   156 SASMVAWRNQLILFGGWR---YPSLHPPYQPWCLFDELHYYDLGKNRWL-LRSSLSSPPPMAGHS 216
            .|.....:.::.:..|:.   .|.....|:.    :.:.:||....:|. :.::.:.|...:..:
plant   186 GAGFAVVQGKIWVVYGFATSIVPGGKDDYES----NAVQFYDPASKKWTEVETTGAKPSARSVFA 246

  Fly   217 ATVHGDRMVVFGGYQIKDDFNVN------SNDTWVLDLPEQRWWQPLFVGNTRPSPR----YGQI 271
            ..|.|..:::|.| ::..|.|.:      ||:.:.|| .|...|:.|........||    |...
plant   247 HAVVGKYIIIFAG-EVWPDLNGHYGPGTLSNEGYALD-TETLVWEKLGEEGAPAIPRGWTAYTAA 309

  Fly   272 QVELGRNHLLIVGG 285
            .|: |:|.||:.||
plant   310 TVD-GKNGLLMHGG 322

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Fbxo42NP_611647.1 F-box_FBXO42 24..61 CDD:438882 6/19 (32%)
NanM <101..307 CDD:442289 47/204 (23%)
KELCH repeat 103..148 CDD:276965 14/49 (29%)
KELCH repeat 154..209 CDD:276965 8/58 (14%)
KELCH repeat 212..257 CDD:276965 12/50 (24%)
KELCH repeat 267..314 CDD:276965 9/23 (39%)
ESPNP_175806.3 PLN02153 1..341 CDD:177814 62/274 (23%)