DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxo42 and AT2G36360

DIOPT Version :10

Sequence 1:NP_611647.1 Gene:Fbxo42 / 37532 FlyBaseID:FBgn0034704 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001318362.1 Gene:AT2G36360 / 818209 AraportID:AT2G36360 Length:518 Species:Arabidopsis thaliana


Alignment Length:289 Identity:83/289 - (28%)
Similarity:123/289 - (42%) Gaps:49/289 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RFAHSAVRQDNSMYVFGGGSSSDTTFNDLWRFDLTHMRWARPVATGTYPSPKGSASMVAWRNQ-L 166
            |..|.|:..|..|::| ||.|......|.|..|....:|:...:.|..|:|:..|:..|..:| :
plant    77 RAFHVAITIDCHMFIF-GGRSGGKRLGDFWVLDTDIWQWSELTSFGDLPTPRDFAAAAAIGSQKI 140

  Fly   167 ILFGGWRYPSLHPPYQPWCLFDELHYYDLGKNRWL-LRSSLSSPPPMAGHSATVHGDRMVVFGGY 230
            :|.|||       ..:.|  ..:::..|.....|| |..|.|.|||..||:||:...|::|||| 
plant   141 VLCGGW-------DGKKW--LSDVYVMDTMSLEWLELSVSGSLPPPRCGHTATMVEKRLLVFGG- 195

  Fly   231 QIKDDFNVNSNDTWVLD--LPEQR---WWQPLFVGNTRPSPRYGQIQVELGRNHLLIVGGCGGAN 290
              :........|.|.|.  :.|:|   .|..|.:....||.|.|. .|..|.::||:.||.|...
plant   196 --RGGGGPIMGDLWALKGLIDEERETPGWTQLKLPGQAPSSRCGH-TVTSGGHYLLLFGGHGTGG 257

  Fly   291 RV------YTDAWLLDMTRDVWSWKSIAVRNK----RFGAVHMWCNPGCKVNNYLVVVGPSPNM- 344
            .:      |.|..:||  |....||.:.:.|:    |  |.|.....|.:   :|::.|....: 
plant   258 WLSRYDVYYNDTIILD--RVTAQWKRLPIGNEPPPPR--AYHTMTCIGAR---HLLIGGFDGKLT 315

  Fly   345 --------PQDFQMMKQSRVPVVGGRGPP 365
                    |:|..:.|:|.||.|  ..||
plant   316 FGDLWWLVPEDDPIAKRSSVPQV--VNPP 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxo42NP_611647.1 F-box_FBXO42 24..61 CDD:438882
NanM <101..307 CDD:442289 65/216 (30%)
KELCH repeat 103..148 CDD:276965 13/44 (30%)
KELCH repeat 154..209 CDD:276965 14/56 (25%)
KELCH repeat 212..257 CDD:276965 15/49 (31%)
KELCH repeat 267..314 CDD:276965 16/52 (31%)
AT2G36360NP_001318362.1 NanM 17..309 CDD:442289 73/252 (29%)
KELCH repeat 20..73 CDD:276965
KELCH repeat 77..124 CDD:276965 14/47 (30%)
KELCH repeat 127..169 CDD:276965 11/50 (22%)
KELCH repeat 235..289 CDD:276965 17/56 (30%)
Blue background indicates that the domain is not in the aligned region.

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