DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxo42 and Klhdc4

DIOPT Version :10

Sequence 1:NP_611647.1 Gene:Fbxo42 / 37532 FlyBaseID:FBgn0034704 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_663580.2 Gene:Klhdc4 / 234825 MGIID:2384569 Length:584 Species:Mus musculus


Alignment Length:235 Identity:64/235 - (27%)
Similarity:106/235 - (45%) Gaps:42/235 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 RFAHSAV---RQDNSMYVFGGGSSSDT-----TFNDLWRFDLTHMRWARPVATGTYPSPKGSASM 159
            |.||.||   :....::||||..:|..     .:.|||...|....|.:..:||. ||.:....|
Mouse   119 RCAHQAVVVPQGGGQLWVFGGEFASPDGEQFYHYKDLWVLHLATKTWEQIRSTGG-PSGRSGHRM 182

  Fly   160 VAWRNQLILFGGWRYPSLHPPYQPWCLFDELHYYDLGKNRWLLRSSLS----SPPPMAG--HSAT 218
            |||:.|||||||:     |...:.:..:.:::.:.|...:|   |.||    .|.|.:|  .:.|
Mouse   183 VAWKRQLILFGGF-----HESARDYIYYSDVYTFSLDTFQW---SKLSPSGPGPTPRSGCLMAVT 239

  Fly   219 VHGDRMVVFGGY---QIKDDFN--VNSNDTWVL---DLPEQRW-WQPLFVGNTRPSPRYGQIQVE 274
            ..|. :.::|||   ::|.|.:  ...:|.::|   :..|.:| |..:.....:|:.|.| ..|.
Mouse   240 PQGS-IAIYGGYSKQRVKKDVDKGTQHSDMFLLKPAEGGEGKWAWTRINPSGVKPTARSG-FSVA 302

  Fly   275 LGRNH-LLIVGG-CGGANR------VYTDAWLLDMTRDVW 306
            :..|| :|:.|| |.....      .::|.::.|..:..|
Mouse   303 VAPNHQILVFGGVCDEEEEESLEGSFFSDLYIYDSAKSRW 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxo42NP_611647.1 F-box_FBXO42 24..61 CDD:438882
NanM <101..307 CDD:442289 64/235 (27%)
KELCH repeat 103..148 CDD:276965 15/52 (29%)
KELCH repeat 154..209 CDD:276965 17/58 (29%)
KELCH repeat 212..257 CDD:276965 13/55 (24%)
KELCH repeat 267..314 CDD:276965 12/48 (25%)
Klhdc4NP_663580.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..69
NanM 59..345 CDD:442289 64/235 (27%)
KELCH repeat 64..115 CDD:276965
Kelch 1 77..129 5/9 (56%)
KELCH repeat 119..174 CDD:276965 17/55 (31%)
Kelch 2 133..187 18/54 (33%)
KELCH repeat 177..223 CDD:276965 16/53 (30%)
Kelch 3 188..238 16/57 (28%)
KELCH repeat 231..293 CDD:276965 13/62 (21%)
Kelch 4 243..289 10/46 (22%)
Kelch 5 308..361 7/35 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..381
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..433
Kelch_1 431..480 CDD:396078
KELCH repeat 432..480 CDD:276965
Kelch 6 443..494
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..533
Blue background indicates that the domain is not in the aligned region.

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