DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxo42 and RABEPK

DIOPT Version :10

Sequence 1:NP_611647.1 Gene:Fbxo42 / 37532 FlyBaseID:FBgn0034704 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_005251697.1 Gene:RABEPK / 10244 HGNCID:16896 Length:380 Species:Homo sapiens


Alignment Length:270 Identity:67/270 - (24%)
Similarity:107/270 - (39%) Gaps:48/270 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TYLPPYGDLEHCSLVCKRWHAIVKNLVRRSR-----HNLEKGLIDFRLRWEVFSQQTVNGGAGAL 96
            :||||.|:       .||....:......:|     |.::.|    :.:|::   .|..|     
Human    45 SYLPPVGN-------AKRGKVFIVGGANPNRSFSDVHTMDLG----KHQWDL---DTCKG----- 90

  Fly    97 LSFIAGRFAHSAVRQD---NSMYVFGGGSSSDTTFNDLWRFDLTHMRWARPVATGTYPSPKG-SA 157
               :..|:.|::....   :.::||||.:.|... |.|...:.....|..|..|...|||:. ..
Human    91 ---LLPRYEHASFIPSCTPDRIWVFGGANQSGNR-NCLQVLNPETRTWTTPEVTSPPPSPRTFHT 151

  Fly   158 SMVAWRNQLILFGGWRYPSLHPPYQPWCLFDELHYYDLGKNRWLLRSSLSSPP-PMAGHSATVHG 221
            |..|..|||.:|||....:  .|.|.    .:||.:|.....|....:|.:|| |..||.....|
Human   152 SSAAIGNQLYVFGGGERGA--QPVQD----TKLHVFDANTLTWSQPETLGNPPSPRHGHVMVAAG 210

  Fly   222 DRMVVFGGYQIKDDFNVNSNDTWVLDLPEQRWWQPLFVGNTRPSPRYGQIQVELGRNHLLIVGG- 285
            .::.:.||. ..|.|   .:|...:|:.:.: ||.|......|:.......|.:|: |:.|.|| 
Human   211 TKLFIHGGL-AGDRF---YDDLHCIDISDMK-WQKLNPTGAAPAGCAAHSAVAMGK-HVYIFGGM 269

  Fly   286 --CGGANRVY 293
              .|..:.:|
Human   270 TPAGALDTMY 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxo42NP_611647.1 F-box_FBXO42 24..61 CDD:438882 7/23 (30%)
NanM <101..307 CDD:442289 54/201 (27%)
KELCH repeat 103..148 CDD:276965 11/47 (23%)
KELCH repeat 154..209 CDD:276965 15/55 (27%)
KELCH repeat 212..257 CDD:276965 11/44 (25%)
KELCH repeat 267..314 CDD:276965 8/30 (27%)
RABEPKXP_005251697.1 NanM 21..278 CDD:442289 66/267 (25%)
KELCH repeat 39..85 CDD:276965 11/50 (22%)
KELCH repeat 94..143 CDD:276965 12/49 (24%)
KELCH repeat 147..197 CDD:276965 15/55 (27%)
KELCH repeat 201..248 CDD:276965 12/51 (24%)
KELCH repeat 251..291 CDD:276965 8/30 (27%)

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