DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3045 and Pusl1

DIOPT Version :10

Sequence 1:NP_611646.1 Gene:CG3045 / 37531 FlyBaseID:FBgn0034703 Length:499 Species:Drosophila melanogaster
Sequence 2:XP_063144165.1 Gene:Pusl1 / 362681 RGDID:1559560 Length:304 Species:Rattus norvegicus


Alignment Length:280 Identity:71/280 - (25%)
Similarity:111/280 - (39%) Gaps:51/280 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LLKITYFGWDYQGFACQEDSNDT--IESNLFRALARTCLIES-RATSNYHRCGRTDKEVSAFCQV 163
            |:...|.|.|:.|.|....::..  :::.|..|..|...:|. |.|.:    .|||..|.|....
  Rat    15 LVFFQYLGTDFNGVAAVRGNHRAVGVQNFLEEAAKRLNSVEPVRFTIS----SRTDAGVHALSNA 75

  Fly   164 ISIDL--RSKHPPES-QLDPTALSSEIDYCGLLNRVLPKNIQCVAWMPLRSP-VYSARFDCVSRT 224
            ..:|:  |...||.| ::...||::.:.:..:  |||         ...|.| .:.||....|||
  Rat    76 AHLDIQRRPGRPPFSPEIVTKALNTHLKHPAI--RVL---------KAFRVPNDFHARHAATSRT 129

  Fly   225 YRYYFPKG---------------------DLDIAAMRKACDLLVRHADFRNFCKMDVHNGVTNYM 268
            |.|....|                     .||||||::|...|:...||..|  ....:.|.:.:
  Rat   130 YLYRLATGCSGPNQLPVFEQNVCWSLQTEYLDIAAMQEAAQHLLGTHDFSAF--QSAGSPVPHAV 192

  Fly   269 RNLQSARVEACDQT----NHTNSGYDMYYLEIQANAFLWHQIRCIMAVLLLVGQKKENPGVISDL 329
            |.|:...|.....:    ...:.....:.||.::.:||:.|:|.:.|||:.||.....|..:..:
  Rat   193 RTLRRVSVSPGPASLFVLPQESRRLQFWTLEFESQSFLYRQVRRMTAVLVAVGLGILAPTQVKVI 257

  Fly   330 LDVESNPCKPQ--YTPAIGL 347
            |:.:....|.|  ..||.||
  Rat   258 LESQDPLGKYQARVAPAHGL 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3045NP_611646.1 PseudoU_synth_ScPus3 103..356 CDD:211336 70/279 (25%)
Pusl1XP_063144165.1 None

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