DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34205 and Pou2af1

DIOPT Version :9

Sequence 1:NP_001097407.1 Gene:CG34205 / 37526 FlyBaseID:FBgn0085234 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001103069.1 Gene:Pou2af1 / 690528 RGDID:1594728 Length:256 Species:Rattus norvegicus


Alignment Length:171 Identity:43/171 - (25%)
Similarity:67/171 - (39%) Gaps:50/171 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 TYAAPAPVIKSYAAPAISYAHAAPA---ISYAAPTVVK---------SYAAPVAVKVAAPATSYS 130
            |...||.|:..: .|..:|:...|:   :..:||||.:         |..||..::..||.|.|:
  Rat    43 TAGPPAAVVLPH-QPLATYSTVGPSCLDMEVSAPTVTEEGTLCAGWLSQPAPATLQPLAPWTPYT 106

  Fly   131 HFSSVVSH------------ATPIVKSYA----APAIAYAAPAPVI-----KSYAAPAI-----S 169
            .:   |||            ..|:..||.    :..:.||:| |:|     :|.|.||:     .
  Rat   107 EY---VSHEAVSCPYSADMYVQPVCPSYTVVGPSSVLTYASP-PLITNVTPRSTATPAVGPQLEG 167

  Fly   170 YAHAAPAISYAAPTVVKSYAAPAISYAAPALVKSYAAPALS 210
            ..|.||...:..|..:.:....::.|..|       ||.||
  Rat   168 PEHQAPLTYFPWPQPLSTLPTSSLQYQPP-------APTLS 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34205NP_001097407.1 None
Pou2af1NP_001103069.1 PD-C2-AF1 7..255 CDD:286403 43/171 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15363
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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