Protein Alignment CG30280 and Fcna

DIOPT Version :10

• Sequence 1: NP_611641.6
• Gene: CG30280 / 37522
• FlyBaseID: FBgn0050280
• Length: 288
• Species: Drosophila melanogaster
• Sequence 2: NP_112638.2
• Gene: Fcna / 83517
• RGDID: 621221
• Length: 335
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 96/215 - (44%)
• Similarity: 128/215 - (59%)
• Gaps: 8/215 - (3%)

  Fly    67 PTSC---LTSGDLENGLHTLKVPGLSPFQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYKNGF 128
            |.||   ||.|....|.:|:.:|...|..|.|:..:.|.||.|.|:|..|:::|:|:|..||.||
  Rat   123 PRSCKDLLTRGIFLTGWYTIYLPDCRPLTVLCDMDVDGGGWTVFQRRVDGSINFYRDWDSYKRGF 187

  Fly   129 GNLMDEYFLGLEKIRALTALEPHELYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKY-SGT 192
            |||..|::||.:.:..|||....||.|.|.:|......||:..|.:..|.:.|.: |||:: .||
  Rat   188 GNLGTEFWLGNDYLHLLTANGNQELRVDLREFQGQTSFAKYSSFQVSGEQEKYKL-TLGQFLEGT 251

  Fly   193 AGDSLRSHRKMKFSTYDRDNDHEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEESLFARGM 257
            |||||..|..|.|||:|:|||....||||..:.|.|||:.|..|||||:|:||.  .|| :|.|:
  Rat   252 AGDSLTKHNNMAFSTHDQDNDTNGGKNCAALFHGAWWYHDCHQSNLNGRYLPGS--HES-YADGI 313

  Fly   258 CWRSWRGHNYGYRVTQMMIR 277
            .|.|.|||.|.|:|.:|.||
  Rat   314 NWLSGRGHRYSYKVAEMKIR 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG30280	NP_611641.6	FReD	65..279	CDD:238040	96/215 (45%)
Fcna	NP_112638.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	47..114
		Collagen	<67..108	CDD:460189
		FReD	123..333	CDD:238040	94/213 (44%)
		A domain, contributes to trimerization. /evidence=ECO:0000250	123..162		13/38 (34%)
		B domain, contributes to trimerization. /evidence=ECO:0000250	163..251		34/88 (39%)
		P domain. /evidence=ECO:0000250|UniProtKB:O00602	326..335		4/8 (50%)