DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30280 and TNR

DIOPT Version :10

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_003276.3 Gene:TNR / 7143 HGNCID:11953 Length:1358 Species:Homo sapiens


Alignment Length:256 Identity:96/256 - (37%)
Similarity:139/256 - (54%) Gaps:17/256 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LEAIYEQAENA--LSTLQESLLQLETNGTLNTSPDVI-YPTSC---LTSGDLENGLHTLKVPG-L 88
            ||.:.|..:..  |...|::.....|:....|...|. :|..|   |.:||..:|::.:.:.| |
Human  1096 LEGLLENTDYTVLLQAAQDTTWSSITSTAFTTGGRVFPHPQDCAQHLMNGDTLSGVYPIFLNGEL 1160

  Fly    89 S-PFQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYKNGFGNLMDEYFLGLEKIRALTALEPHE 152
            | ..||||:....|.||||.|:|.:|...|||.|.:|:.||||:.||::|||:.|..:|:...:|
Human  1161 SQKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWADYRVGFGNVEDEFWLGLDNIHRITSQGRYE 1225

  Fly   153 LYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKYSGTAGDSLRSHRKMKFSTYDRDNDHEFN 217
            |.|.:.|..:. ..|.:|.|::.:..:.|.:. :|.|:|||||||..|:...|||.|||||....
Human  1226 LRVDMRDGQEA-AFASYDRFSVEDSRNLYKLR-IGSYNGTAGDSLSYHQGRPFSTEDRDNDVAVT 1288

  Fly   218 KNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEESLFARGMCWRSWRGHNYGYRVTQMMIRP 278
             |||..|.|.|||..|..:|||      |||.||..::|:.|..|:||.:.....:|.:||
Human  1289 -NCAMSYKGAWWYKNCHRTNLN------GKYGESRHSQGINWYHWKGHEFSIPFVEMKMRP 1342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 88/220 (40%)
TNRNP_003276.3 EGF_Tenascin 203..231 CDD:376143
C_rich_MXAN6577 207..312 CDD:469225
EGF_Tenascin 235..261 CDD:480934
fn3 328..398 CDD:394996
fn3 416..496 CDD:394996
fn3 507..583 CDD:394996
FN3 <566..919 CDD:442628
fn3 954..1026 CDD:394996
FN3 1042..1127 CDD:238020 6/30 (20%)
FReD 1133..1342 CDD:238040 86/217 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.