DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30280 and fibcd1b

DIOPT Version :9

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:XP_005171959.1 Gene:fibcd1b / 567525 ZFINID:ZDB-GENE-070424-245 Length:492 Species:Danio rerio


Alignment Length:271 Identity:107/271 - (39%)
Similarity:152/271 - (56%) Gaps:28/271 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NLEAIYEQAENALSTLQESL--LQLETNGTLNTSP----------DVIYPTSC---LTSGDLENG 79
            |:..:.....:||:.:|:..  |:......|..:|          :...|..|   ..||..|:|
Zfish   220 NMVKVVNSVSDALNAMQKETGGLKARVKADLQRAPVRGVRLKGCANGSRPRDCSDIYASGQREDG 284

  Fly    80 LHTLKVPGLSP--FQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYKNGFGNLMDEYFLGLEKI 142
            :::: .|...|  |||||:....|.||.|||:|..|:::|||.|..|:.|||.:..||:|||::|
Zfish   285 IYSV-FPTHYPAGFQVYCDMSTDGGGWTVIQRREDGSVNFFREWDSYREGFGKITGEYWLGLKQI 348

  Fly   143 RALTALEPHELYVHLEDFDDTIKHAKFDEFAIG-----NEDDDYAMNTLGKYSGTAGDSLRSHRK 202
            .||:....:||.:.||||:::...|::..|.:|     .|||.|.: |:..|:|||||||..|..
Zfish   349 HALSIQGNYELRIDLEDFENSTAFAQYGVFGVGLFSVDPEDDGYPL-TIADYTGTAGDSLLKHNG 412

  Fly   203 MKFSTYDRDNDHEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEESLFARGMCWRSWRGHNY 267
            |||:|.||||||..| |||.:|.|.|||..|..|||||||:.|   :.:.:|.|:.|.||.|..|
Zfish   413 MKFTTKDRDNDHSEN-NCASFYHGAWWYRNCHTSNLNGQYLRG---QHTSYADGIEWSSWTGWQY 473

  Fly   268 GYRVTQMMIRP 278
            ..:.|:|.|||
Zfish   474 SLKFTEMKIRP 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 100/224 (45%)
fibcd1bXP_005171959.1 FReD 269..484 CDD:238040 98/220 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3199
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H122246
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D242508at33208
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 1 1.000 - - mtm6504
orthoMCL 1 0.900 - - OOG6_100073
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.920

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