DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30280 and fcn1

DIOPT Version :10

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_001004935.1 Gene:fcn1 / 448331 XenbaseID:XB-GENE-5725057 Length:329 Species:Xenopus tropicalis


Alignment Length:217 Identity:84/217 - (38%)
Similarity:128/217 - (58%) Gaps:9/217 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PTSC---LTSGDLENGLHTLKVPGLSPFQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYKNGF 128
            |.:|   |.:|....|.:|:...|..|.:|.|:....|.||||.|:|..|::.|:|:||.||.||
 Frog   118 PKNCVELLNNGATLTGWYTVSPDGNKPIKVLCDMDTDGGGWIVFQRRVDGSVDFYRDWKSYKQGF 182

  Fly   129 GNLMDEYFLGLEKIRALTALEPHELYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKYS-GT 192
            |:.:.|::||.|.|..||:....:|...|||||:..|:|.:.:|.:..|...|.:. .|::: |.
 Frog   183 GSQVGEFWLGNENIHLLTSSGNFQLRFDLEDFDNNRKYATYSQFRLEGESQKYTLR-FGEFTGGP 246

  Fly   193 AGDSLRSHRKMKFSTYDRDNDHEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEESLFARGM 257
            |||||.||....|.|.|.||| |.:.|||..:.|.|||:.|..|.|||:|: .|:::|:  ..|:
 Frog   247 AGDSLSSHNNKAFQTKDVDND-ESDSNCAESFKGAWWYHDCYSSCLNGEYL-RGEHDEA--DGGV 307

  Fly   258 CWRSWRGHNYGYRVTQMMIRPK 279
            .|..:||::|..:|:::..||:
 Frog   308 NWGEFRGNDYSLKVSEIKFRPQ 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 83/215 (39%)
fcn1NP_001004935.1 gly_rich_SclB <51..>115 CDD:468478
FReD 116..328 CDD:238040 82/214 (38%)
Blue background indicates that the domain is not in the aligned region.

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