DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30280 and col11a2l

DIOPT Version :10

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_001005799.1 Gene:col11a2l / 448277 XenbaseID:XB-GENE-12564499 Length:340 Species:Xenopus tropicalis


Alignment Length:209 Identity:83/209 - (39%)
Similarity:118/209 - (56%) Gaps:3/209 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LTSGDLENGLHTLKVPGLSPFQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYKNGFGNLMDEY 135
            |..|.|..|.:|:.:.|..|.:|.|:....|.||||.|:|..|::.|:|:||.||.|||:.:.|:
 Frog   134 LNYGVLFTGWYTIYLDGNKPIKVLCDMDTDGGGWIVFQRRVDGSVDFYRDWKSYKQGFGSQLSEF 198

  Fly   136 FLGLEKIRALTALEPHELYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKYSGTAGDSLRSH 200
            :||.|.|..||:....:|...|||||:...:|.:.:|.:..|..:|.:.......|.|||||.:|
 Frog   199 WLGNENIHRLTSSGNFQLRFDLEDFDNNRTYATYSQFRLEPESQNYTLRFREFTGGPAGDSLFTH 263

  Fly   201 RKMKFSTYDRDNDHEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEESLFARGMCWRSWRGH 265
            :...|||.|.|||.....|||..|.|.|||.:|..|.|||:||.|   :......|:.|..:||.
 Frog   264 KDRAFSTKDADNDPASKTNCAERYKGAWWYESCYHSCLNGEYMRG---QHDKADGGVHWAKFRGV 325

  Fly   266 NYGYRVTQMMIRPK 279
            ||..:|::|.:||:
 Frog   326 NYSLKVSEMKLRPE 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 82/207 (40%)
col11a2lNP_001005799.1 Collagen 48..110 CDD:460189
FReD 128..338 CDD:238040 81/206 (39%)
Blue background indicates that the domain is not in the aligned region.

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