DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30280 and tnr

DIOPT Version :9

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_919364.1 Gene:tnr / 369191 ZFINID:ZDB-GENE-030804-1 Length:1350 Species:Danio rerio


Alignment Length:262 Identity:101/262 - (38%)
Similarity:148/262 - (56%) Gaps:29/262 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LEAIYEQAENALSTLQESLLQ----LETNGTLNTS---PDVIYPT--SC---LTSGDLENGLHTL 83
            ||.:.|..|..:.      ||    |||:..::||   .:.::||  :|   |.:|:...|::|:
Zfish  1089 LEGLAETTEYTVR------LQVARGLETSVIVSTSFTTGNRLFPTPQNCAQHLLNGETLGGIYTI 1147

  Fly    84 KV-PGLSP-FQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYKNGFGNLMDEYFLGLEKIRALT 146
            .| ..||. .||||:....|.||||.|:|.:|...|.|.|.:||.|||:|.||::|||:.|..:.
Zfish  1148 YVNRDLSQGVQVYCDMTTDGGGWIVFQRRQNGLTDFSRKWTDYKIGFGSLEDEFWLGLDNIHKIA 1212

  Fly   147 ALEPHELYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKYSGTAGDSLRSHRKMKFSTYDRD 211
            |...:||.:.::|..::: :|.:|.|:||:....|.:. :|:|||||||||..|:...|||.|:|
Zfish  1213 AQGRYELRIDMKDGQESV-YANYDRFSIGDSKSLYKLR-IGEYSGTAGDSLSYHQSRPFSTKDKD 1275

  Fly   212 NDHEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEESLFARGMCWRSWRGHNYGYRVTQMMI 276
            ||.... |||..|.|.|||..|..:|||      |||.||..::|:.|..|:||.:.....:|.:
Zfish  1276 NDIAVT-NCALSYKGAWWYKNCHRANLN------GKYGESRHSQGINWYHWKGHEFSIPFVEMKM 1333

  Fly   277 RP 278
            ||
Zfish  1334 RP 1335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 90/221 (41%)
tnrNP_919364.1 EGF_2 199..225 CDD:285248
EB 234..283 CDD:279949
EGF_2 294..318 CDD:285248
fn3 323..401 CDD:278470
fn3 411..490 CDD:278470
fn3 500..579 CDD:278470
FN3 590..674 CDD:238020
fn3 682..754 CDD:278470
fn3 771..849 CDD:278470
FN3 859..935 CDD:214495
fn3 949..1019 CDD:278470
fn3 1035..1103 CDD:278470 4/19 (21%)
FReD 1126..1336 CDD:238040 90/219 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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