DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30280 and Angptl4

DIOPT Version :10

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_954546.1 Gene:Angptl4 / 362850 RGDID:735058 Length:405 Species:Rattus norvegicus


Alignment Length:240 Identity:82/240 - (34%)
Similarity:127/240 - (52%) Gaps:21/240 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LLQLETNGTLNTSPDVIYPTSC---LTSGDLENGLHTLKVPGLSPFQVYCENQLAGPGWIVIQKR 110
            |:.|..|.|....|    |..|   ...|:..:||..::..|..||.|.||....| ||.|||:|
  Rat   170 LIGLTPNATRLHRP----PRDCQELFQEGERHSGLFQIQPLGSPPFLVNCEMTSDG-GWTVIQRR 229

  Fly   111 FSGNLSFFRNWKEYKNGFGNLMDEYFLGLEKIRALTALEPHELYVHLEDFDDTIKHAKFDEFAIG 175
            .:|::.|.::|:.||:|||:...|::|||||:.::|.....:|.|.|:|:|...|..:| ...:|
  Rat   230 LNGSVDFNQSWEAYKDGFGDPQGEFWLGLEKMHSITGDRGSQLAVQLQDWDGNAKLLQF-PIHLG 293

  Fly   176 NEDDDYAM-------NTLGKYSGTAGDSLRSHRKMKFSTYDRDNDHEFNKNCAFYYLGGWWYNAC 233
            .||..|::       |.||. :..:.:.|    .:.|||:|:|:|...:.|||....||||:..|
  Rat   294 GEDTAYSLQLTEPTANELGA-TNVSPNGL----SLPFSTWDQDHDLRGDLNCAKSLSGGWWFGTC 353

  Fly   234 LDSNLNGQYMPGGKYEESLFARGMCWRSWRGHNYGYRVTQMMIRP 278
            ..|||||||......:.....:|:.|::|:|..|..:.|.::|:|
  Rat   354 SHSNLNGQYFHSIPRQRQQRKKGIFWKTWKGRYYPLQATTLLIQP 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 77/224 (34%)
Angptl4NP_954546.1 FReD 182..399 CDD:238040 78/228 (34%)

Return to query results.
Submit another query.