DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30280 and tnn

DIOPT Version :10

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:XP_005171321.1 Gene:tnn / 30234 ZFINID:ZDB-GENE-990415-262 Length:1020 Species:Danio rerio


Alignment Length:219 Identity:78/219 - (35%)
Similarity:118/219 - (53%) Gaps:15/219 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YPTSC---LTSGDLENGLHTLKVPG--LSPFQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYK 125
            :|..|   :.:|::|:|::|:.|..  ....||||:.:..|.||||.|:|.:|.:.|.:.|::|.
Zfish   793 FPMDCTQIMRNGNMESGVYTIYVNNNRSRTMQVYCDMKTDGGGWIVFQRRNTGKVDFMKKWRDYM 857

  Fly   126 NGFGNLMDEYFLGLEKIRALT-ALEPHELYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKY 189
            .|||.|.:|::|||:||..|| ....:|....|....|. |:|.:|.|.:......:.: |:|.|
Zfish   858 KGFGELTEEFWLGLDKIHELTNTPTQYEARFDLGSGSDR-KYAVYDNFKVAPSKQKFKL-TIGSY 920

  Fly   190 SGTAGDSLRSHRKMKFSTYDRDNDHEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEESLFA 254
            .|.|||::..|:...|||.|.|||.... |||..:.|.|||..|..:||||::   |....|:  
Zfish   921 KGNAGDAMTYHQGAPFSTVDSDNDIALG-NCALTHQGAWWYKNCHLANLNGRF---GDNRHSM-- 979

  Fly   255 RGMCWRSWRGHNYGYRVTQMMIRP 278
             |:.|..|:||.......::.|||
Zfish   980 -GVNWEPWKGHLQSLDFAEIKIRP 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 78/219 (36%)
tnnXP_005171321.1 EGF_alliinase <133..163 CDD:398501
EGF_Tenascin 163..190 CDD:480934
EGF_Tenascin 194..221 CDD:480934
EGF_Tenascin 225..252 CDD:480934
fn3 257..333 CDD:394996
fn3 347..426 CDD:394996
FN3 405..818 CDD:442628 7/24 (29%)
FReD 792..1003 CDD:238040 78/219 (36%)
Blue background indicates that the domain is not in the aligned region.

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