DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30280 and Mfap4

DIOPT Version :9

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:XP_006246622.1 Gene:Mfap4 / 287382 RGDID:1307841 Length:281 Species:Rattus norvegicus


Alignment Length:307 Identity:98/307 - (31%)
Similarity:142/307 - (46%) Gaps:66/307 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GVPVFSVCIALSVMIFCHAETLNLFGNLEAIYEQAENALSTLQESLLQLETNGTLNTSPDVIYPT 68
            |:|:  :.:.||....|..:...:.|:             .|::|.||              .|.
  Rat     6 GLPL--LLLLLSTPPPCAPQASGIRGD-------------ALEKSCLQ--------------QPL 41

  Fly    69 SC---LTSGDLENGLHTLKVPGLS-PFQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYKNGFG 129
            .|   ...|..|:|::.:...|.| |..|:|:....|..|.|.||||:|::||||.|.:||.|||
  Rat    42 DCDDIYMQGYQEDGVYLIYPYGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFG 106

  Fly   130 NLMDEY------------------------FLGLEKIRALTALEPHELYVHLEDFDDTIKHAKFD 170
            ....||                        :|||:.:..||..:.:||.|.||||::...:||:.
  Rat   107 RADGEYWLGKVGSWGGGCPLANSWLTSCHPYLGLQNLHLLTLKQKYELRVDLEDFENNTAYAKYV 171

  Fly   171 EF-----AIGNEDDDYAMNTLGKYSGTAGDSLRSHRKMKFSTYDRDNDHEFNKNCAFYYLGGWWY 230
            :|     |:..|:|.|.:...|...|.|||||..|...||||:|||.| .|.:|||....|.:|:
  Rat   172 DFSISPNAVSAEEDGYTLYVAGFEDGGAGDSLSYHSGQKFSTFDRDQD-LFVQNCAALSSGAFWF 235

  Fly   231 NACLDSNLNGQYMPGGKYEESLFARGMCWRSWRGHNYGYRVTQMMIR 277
            .:|..:||||.|:.|....   :|.|:.|..|:|..|..:.|:|.||
  Rat   236 RSCHFANLNGFYLGGSHLS---YANGINWAQWKGFYYSLKRTEMKIR 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 88/246 (36%)
Mfap4XP_006246622.1 FReD 38..280 CDD:238040 89/260 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 186 1.000 Domainoid score I3251
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 1 1.000 - - mtm12326
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.010

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