DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30280 and tnn

DIOPT Version :9

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:XP_017949080.2 Gene:tnn / 100491528 XenbaseID:XB-GENE-998034 Length:1109 Species:Xenopus tropicalis


Alignment Length:227 Identity:85/227 - (37%)
Similarity:132/227 - (58%) Gaps:20/227 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VIYPTSCL---TSGDLENGLHTLKVPG---LSPFQVYCENQLAGPGWIVIQKRFSGNLSFFRNWK 122
            :.:|:.|:   .||:.::|::|: .||   ....:|||:.:..|.||||.|:|.||.|.|::.|:
 Frog   893 ITHPSDCIQIQLSGNRQSGVYTI-YPGGDTAKGVRVYCDQETDGGGWIVFQRRNSGKLDFYQRWR 956

  Fly   123 EYKNGFGNLMDEYFLGLEKIRALTALEP---HELYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMN 184
            .|..|||:..||::||||.|..||: .|   :|:.|.|...|::: :|.:..|.:|:..|.|.: 
 Frog   957 TYVEGFGDPSDEFWLGLEWIHKLTS-SPGNNYEIRVDLRAGDESV-YAFYRNFRVGSSKDRYKL- 1018

  Fly   185 TLGKYSGTAGDSLRSHRKMKFSTYDRDNDHEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKYE 249
            ::..|||||||.|..|...||||:|:|||.... |||..:.|.:||..|..:|||||      |.
 Frog  1019 SISDYSGTAGDGLTYHNGWKFSTWDKDNDIALT-NCALSHRGAFWYKNCHLANLNGQ------YG 1076

  Fly   250 ESLFARGMCWRSWRGHNYGYRVTQMMIRPKCR 281
            |:..::|:.|..|:||.:.....:|.:||..:
 Frog  1077 ETGHSQGVNWEPWKGHEFSVPFVEMKMRPNLK 1108

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 84/222 (38%)
tnnXP_017949080.2 exchanger_TraA <124..432 CDD:411343
fn3 449..513 CDD:394996
fn3 543..619 CDD:394996
fn3 630..707 CDD:394996
fn3 716..788 CDD:394996
fn3 803..879 CDD:394996
FReD 895..1105 CDD:238040 83/220 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 182 1.000 Domainoid score I3392
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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