DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30280 and tnca

DIOPT Version :10

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:XP_068077498.1 Gene:tnca / 100149028 ZFINID:ZDB-GENE-130530-849 Length:2336 Species:Danio rerio


Alignment Length:260 Identity:95/260 - (36%)
Similarity:140/260 - (53%) Gaps:28/260 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AENALSTLQES-----LLQLETN-------GTLNTSPDVIY--PTSC---LTSGDLENGLHTLKV 85
            |.:.||.|:.:     :||..:.       .|..|:..::|  |..|   |.:|:..:|.:|:.:
Zfish  2073 ASHTLSNLRSTTKYTVILQAVSEDKRSRSISTEFTTVGMLYGHPRDCSEALLNGETSSGPYTIYI 2137

  Fly    86 PG--LSPFQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYKNGFGNLMDEYFLGLEKIRALTAL 148
            .|  ..|.:|||:....|.||::..:|.||.|:|:|||:.|..|||:..||::|||..:..:||.
Zfish  2138 NGDEKQPLRVYCDMTTDGGGWMLFLRRQSGKLNFYRNWRNYSAGFGDTSDEFWLGLSNLHKITAA 2202

  Fly   149 EPHELYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKYSGTAGDSLRSHRKMKFSTYDRDND 213
            :.:|:.|.|.|..:|: .|.:|.|.||:....|.:. :|.|||||||||..|:...|||||.|||
Zfish  2203 KQYEIRVDLRDGSETV-FAVYDRFYIGDPRSRYKIQ-IGAYSGTAGDSLTYHQNRPFSTYDSDND 2265

  Fly   214 HEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEESLFARGMCWRSWRGHNYGYRVTQMMIRP 278
            .... |||..|.|.:||..|...||.      |||.:|..::|:.|..|:||.:.....:|.|||
Zfish  2266 IAIT-NCALSYKGAFWYKNCHRVNLM------GKYGDSSHSKGINWFHWKGHEHSIPFAEMKIRP 2323

  Fly   279  278
            Zfish  2324  2323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 87/221 (39%)
tncaXP_068077498.1 EGF_Tenascin 191..218 CDD:480934
EGF_Tenascin 253..280 CDD:480934
EGF_Tenascin 315..342 CDD:480934
EGF_Tenascin 377..404 CDD:480934
EGF_Tenascin 408..434 CDD:480934
EGF_Tenascin 439..466 CDD:480934
C_rich_MXAN6577 449..578 CDD:469225
EGF_Tenascin 470..497 CDD:480934
FN3 593..679 CDD:238020
fn3 682..763 CDD:394996
FN3 742..1122 CDD:442628
FN3 1087..1171 CDD:238020
fn3 1210..1289 CDD:394996
fn3 1301..1376 CDD:394996
fn3 1392..1464 CDD:394996
FN3 1486..1570 CDD:238020
fn3 1574..1649 CDD:394996
fn3 1665..1740 CDD:394996
fn3 1756..1829 CDD:394996
fn3 1846..1925 CDD:394996
fn3 1935..2013 CDD:394996
fn3 2023..2096 CDD:394996 6/22 (27%)
FReD 2114..2323 CDD:238040 84/217 (39%)
Blue background indicates that the domain is not in the aligned region.

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