DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30280 and tnr

DIOPT Version :9

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_001107287.1 Gene:tnr / 100135076 XenbaseID:XB-GENE-948286 Length:1350 Species:Xenopus tropicalis


Alignment Length:256 Identity:92/256 - (35%)
Similarity:138/256 - (53%) Gaps:17/256 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LEAIYEQAENALSTL--QESLLQLETNGTLNTSPDVI-YPTSC---LTSGDLENGLHTLKVPG-- 87
            ||.:.|..|..:|.|  |.......|:....|...|. ||..|   :.:||.::|::.:.:.|  
 Frog  1091 LEGLLESTEYTVSILSVQNGERSSVTHTVFTTGGRVFSYPQDCAQHMLNGDNQSGVYYIYINGDM 1155

  Fly    88 LSPFQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYKNGFGNLMDEYFLGLEKIRALTALEPHE 152
            .....|||:......||||.|:|.:|...|||.|.:|:.|||||.||::|||:.:..:|:...:|
 Frog  1156 SQSVPVYCDMATDAGGWIVFQRRQNGLTDFFRKWADYRVGFGNLEDEFWLGLDTLHQVTSQGRYE 1220

  Fly   153 LYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKYSGTAGDSLRSHRKMKFSTYDRDNDHEFN 217
            |.:.:.|..:.: :|.:::|.||:....|.:. :|.::||:||||..|:...|||.|||||....
 Frog  1221 LRIDMRDGQEAV-YAYYNKFNIGDARSLYKLR-IGDFNGTSGDSLTYHQGRPFSTKDRDNDVAVT 1283

  Fly   218 KNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEESLFARGMCWRSWRGHNYGYRVTQMMIRP 278
             |||..|.|.|||..|..:|||      |||.||..::|:.|..|:||.:.....:|.:||
 Frog  1284 -NCASSYKGAWWYKNCHRTNLN------GKYGESRHSQGINWYHWKGHEFSIPFVEMKMRP 1337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 82/220 (37%)
tnrNP_001107287.1 EGF_alliinase 153..196 CDD:282688
EGF_2 198..223 CDD:285248
EGF_2 260..285 CDD:285248
EGF_2 292..316 CDD:285248
FN3 321..410 CDD:238020
fn3 413..493 CDD:278470
fn3 502..582 CDD:278470
FN3 592..676 CDD:238020
fn3 684..763 CDD:278470
fn3 773..840 CDD:278470
fn3 862..939 CDD:278470
fn3 949..1018 CDD:278470
FN3 1037..1122 CDD:238020 8/30 (27%)
FReD 1129..1337 CDD:238040 80/216 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 182 1.000 Domainoid score I3392
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9330
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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