DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30280 and fga

DIOPT Version :10

Sequence 1:NP_611641.6 Gene:CG30280 / 37522 FlyBaseID:FBgn0050280 Length:288 Species:Drosophila melanogaster
Sequence 2:XP_002933535.3 Gene:fga / 100038060 XenbaseID:XB-GENE-478771 Length:761 Species:Xenopus tropicalis


Alignment Length:226 Identity:81/226 - (35%)
Similarity:126/226 - (55%) Gaps:24/226 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SGDLENGLHTLKVPGLSP-FQVYCENQLAGPGWIVIQKRFSGNLSFFRNWKEYKNGFGNL----M 132
            |...::|:..::..|.:. ..|||:......|||:||:|..|:::|.|.|::||||||::    .
 Frog   535 SSGAKSGIFKIRPEGSTKVLSVYCDQDTQLGGWILIQQRQDGSVNFNRTWQDYKNGFGSVDAGGK 599

  Fly   133 DEYFLGLEKIRALTALEPHELYVHLEDFDDTIKHAKFDEFAIGNEDDDYAMNTLGKYSGTAGDSL 197
            .|.:||.|.|..||..:. .|.:.|||:.....:|::: ..:|:|.:.:.:. :.:|.|||||:|
 Frog   600 GEVWLGNENIHLLTQKDT-ILRIELEDWSGEKVYAEYN-IQLGSEAEGFTLK-VSQYEGTAGDAL 661

  Fly   198 ----------RSHRKMKFSTYDRDNDHEFNKNCAFYYLGGWWYNACLDSNLNGQYMPGGKYEES- 251
                      .||..|||||||||:| ::.:|||..|.||||||.|..|||||.|..||:|:.. 
 Frog   662 IEGSKEDGEYTSHINMKFSTYDRDSD-KWEENCAEMYGGGWWYNNCQASNLNGIYYIGGQYDPRN 725

  Fly   252 ----LFARGMCWRSWRGHNYGYRVTQMMIRP 278
                ....|:.|..::..:|..:..:|.:||
 Frog   726 NFPYEIENGVVWVPFKAADYSLKTVRMKMRP 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30280NP_611641.6 FReD 65..279 CDD:238040 81/226 (36%)
fgaXP_002933535.3 Fib_alpha 50..191 CDD:462570
FReD 523..757 CDD:238040 81/226 (36%)
Blue background indicates that the domain is not in the aligned region.

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