DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vrp1 and VRP1

DIOPT Version :9

Sequence 1:NP_001097406.1 Gene:Vrp1 / 37521 FlyBaseID:FBgn0243516 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_013441.1 Gene:VRP1 / 851051 SGDID:S000004329 Length:817 Species:Saccharomyces cerevisiae


Alignment Length:952 Identity:223/952 - (23%)
Similarity:315/952 - (33%) Gaps:352/952 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GPPPPPGPPPPPAMGGLKLGGAGGA-DARSALLSSIQKGTKLKKTTTVDKSGPALSGKVCGGDGG 71
            |.|.||.||||||:||.....|... ..|.|||..|:||.||||..|.|:|.|.:.|.|.....|
Yeast     3 GAPAPPPPPPPPALGGSAPKPAKSVMQGRDALLGDIRKGMKLKKAETNDRSAPIVGGGVVSSASG 67

  Fly    72 AGIGAKRTLNNNTSTSNHNNSSSSSNGLGNGTPKLGGLFEGLSQMPKLKPVNGIRAT-PSAGSAA 135
                      ::.:.|:...|.|:....|.|.|:||.:..|  .:||||.:|...:| ||..::|
Yeast    68 ----------SSGTVSSKGPSMSAPPIPGMGAPQLGDILAG--GIPKLKHINNNASTKPSPSASA 120

  Fly   136 TTTSKSTTNSSAQQRSNSP----PAATSASNASNGPM-DFNTELTKHLTLKRQKQ------QQQQ 189
            .....:..:.:|....|:|    ||..|..::|..|: |..:.....:.:.....      ....
Yeast   121 PPIPGAVPSVAAPPIPNAPLSPAPAVPSIPSSSAPPIPDIPSSAAPPIPIVPSSPAPPLPLSGAS 185

  Fly   190 QPQPPTNNTHINATEANLRTNR-----------GPPPQPPKSANSNDSILERMNIPRTAPTPPFG 243
            .|:.|.|..|:.:.....|:::           ..||.|..|..::.|     |.|:..|.||  
Yeast   186 APKVPQNRPHMPSVRPAHRSHQRKSSNISLPSVSAPPLPSASLPTHVS-----NPPQAPPPPP-- 243

  Fly   244 NSSSVKAASPTLSDSGSNSSGSGGGSGSVKSKAANLNISLGNSFVNSSKSTVSAS----TASLNS 304
                    :||:               .:.||    ||...::.|:...|.|.|.    .|.:|:
Yeast   244 --------TPTI---------------GLDSK----NIKPTDNAVSPPSSEVPAGGLPFLAEINA 281

  Fly   305 SLTSSTGSVRNLAPNKSTLFGGSSGSSSGSSSGGGYASVHKSSPPSTADSTPSVTPT-PPPLQLP 368
            . .|..|:|..::..|.......|.|.....|         |:||......|.:.|| |||..||
Yeast   282 R-RSERGAVEGVSSTKIQTENHKSPSQPPLPS---------SAPPIPTSHAPPLPPTAPPPPSLP 336

  Fly   369 ---MKPAISFGKPNFAPKPPGLNQLAMANGQQRPAVTRHHSMKSPRSPPAAGIVNGLVFPTQQHL 430
               ..|..:...|  ||.||.| ..||::...       :|:|:...||                
Yeast   337 NVTSAPKKATSAP--APPPPPL-PAAMSSAST-------NSVKATPVPP---------------- 375

  Fly   431 GTLRGPLQFHGSESSSPNTSAGSMRCAPNPPKSRPSVKPPPPPTPARSFSNTNLNNIGGSTMFSA 495
             ||..||         |||::    ..||...|.|:..|||||.|. :||               
Yeast   376 -TLAPPL---------PNTTS----VPPNKASSMPAPPPPPPPPPG-AFS--------------- 410

  Fly   496 VNTALIQSSAISSQAPSPPITQPPSSSSSSNSVAALRDQFRGGAGMSNGAPSPPLPPTPAPSSNP 560
            .::||..||...:..|.||   |||.::|                    .||.| ||.|..::|.
Yeast   411 TSSALSASSIPLAPLPPPP---PPSVATS--------------------VPSAP-PPPPTLTTNK 451

  Fly   561 SSASASPKSLLRDNVKPIILNGGPL---------------------------------------- 585
            .|||:....:...:....:..||||                                        
Yeast   452 PSASSKQSKISSSSSSSAVTPGGPLPFLAEIQKKRDDRFVVGGDTGYTTQDKQEDVIGSSKDDNV 516

  Fly   586 ---------NPP----------------------------APPPHR---------SCPPPP---P 601
                     |||                            |||||.         |.||||   .
Yeast   517 RPSPISPSINPPKQSSQNGMSFLDEIESKLHKQTSSNAFNAPPPHTDAMAPPLPPSAPPPPITSL 581

  Fly   602 PQRQSSNQDRVKYWIDK--TVYSFKKILHINRQGRHSGESVKVINMLNSKRNGGSGS-------- 656
            |...:|..|...   ||  ||...||.......|......|..:...:||.|..:.|        
Yeast   582 PTPTASGDDHTN---DKSETVLGMKKAKAPALPGHVPPPPVPPVLSDDSKNNVPAASLLHDVLPS 643

  Fly   657 -------------------GSAPVPPQRH---------------------SSIRPNAPSTPPTHM 681
                               .|||..||:.                     .||..|...:||...
Yeast   644 SNLEKPPSPPVAAAPPLPTFSAPSLPQQSVSTSIPSPPPVAPTLSVRTETESISKNPTKSPPPPP 708

  Fly   682 ANASHQFGSSSGLS-------------------------------------SGSGAGAAASVGRL 709
            :.::...|:|:..|                                     |.|..||.:...|:
Yeast   709 SPSTMDTGTSNSPSKNLKQRLFSTGGSTLQHKHNTHTNQPDVDVGRYTIGGSNSIVGAKSGNERI 773

  Fly   710 VNDLETKFGKRFHNVTEFPKPPPFLNIQKVYPSRTFKATNAP 751
            |.| :::|  ::.||::.|||.||.|..|:|||.  |.::.|
Yeast   774 VID-DSRF--KWTNVSQMPKPRPFQNKTKLYPSG--KGSSVP 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vrp1NP_001097406.1 None
VRP1NP_013441.1 WH2_WAS_WASL 27..55 CDD:409207 14/27 (52%)
PRK14951 <109..>240 CDD:237865 25/135 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344007
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53287
OrthoFinder 1 1.000 - - FOG0006482
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.800

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