DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vrp1 and Wipf2

DIOPT Version :9

Sequence 1:NP_001097406.1 Gene:Vrp1 / 37521 FlyBaseID:FBgn0243516 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_922922.1 Gene:Wipf2 / 68524 MGIID:1924462 Length:440 Species:Mus musculus


Alignment Length:761 Identity:179/761 - (23%)
Similarity:230/761 - (30%) Gaps:338/761 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAIPPPPGPPPPPGPPPPPAMGGL-----KLGGAGGADARSALLSSIQKGTKLKKTTTV-DKSGP 59
            |.||||  |||||||||||.....     ||......: |.|||..|.|||||||.|.| |:|.|
Mouse     1 MPIPPP--PPPPPGPPPPPTFNQANTEQPKLSRDEQRN-RGALLQDICKGTKLKKVTNVNDRSAP 62

  Fly    60 ALSGKVCGGDGGAGIGAKRTLNNNTSTSNHNNSSSSSNGLGNGTPKLGGLFEGLSQMPKLKPVNG 124
            .:. |..|..||.|.||...                       .|| ||||:|  .:|||:||..
Mouse    63 VIE-KPRGSSGGYGPGAAAL-----------------------QPK-GGLFQG--GVPKLRPVGA 100

  Fly   125 IRATPS-AGSAATTTSKSTTNSSAQQRSNSP-PAATSASNASNGPMDFNTELTKHLTLKRQKQQQ 187
            ..|:.: ||..|.....|        |:.:| |..::||...:...|.|......|       .:
Mouse   101 KDASEAPAGKPALQVPSS--------RAAAPRPPGSAASGRPHDDTDSNRASLPEL-------PR 150

  Fly   188 QQQPQPPTNNTHINATEANLRTNRGPPPQPPKSANSNDSILERMNIPRTAPTPPFGNSSSVKAAS 252
            .|:|..|..:....|:...::.:...||.||..        .|.|.|.| |.|...|        
Mouse   151 MQRPSLPDLSRPNTASGTGMKHSSSAPPPPPPG--------RRANAPPT-PLPLHSN-------- 198

  Fly   253 PTLSDSGSNSSGSGGGSGSVKSKAANLNISLGNSFVNSSKSTVSASTASLNSSLTSSTGSVRNLA 317
                                |::|.|..                                 :.|.
Mouse   199 --------------------KAQAYNRE---------------------------------KPLP 210

  Fly   318 PNK-STLFGGSSGSSSGSSSGGGYASVHKSSPPSTADSTPSVTPTPPPLQLPMKPAISFGKPNFA 381
            |.. ..|..|..|              |.:.||        |.|.|.|:.:...|:   |: :.|
Mouse   211 PTPGQRLHPGREG--------------HPAPPP--------VKPPPSPVNIRTGPS---GQ-SLA 249

  Fly   382 PKPPGLNQLAMANGQQRPAVTRHHSMKSPRSPPAAGIVNGLVFPTQQHLGTLRGPLQFHGSESSS 446
            |.||..                       |.||  |:.||...||.:             |....
Mouse   250 PPPPPY-----------------------RQPP--GVPNGPSSPTNE-------------SAPEL 276

  Fly   447 PNTSAGSMRCAPNPPKSRPSVKPPPPPTPARSFSNTNLNNIGGSTMFSAVNTALIQSSAISSQAP 511
            |.......|..|.|.:.    ..|||||.|                          :.::.|..|
Mouse   277 PQRHNSLHRKTPGPVRG----LAPPPPTSA--------------------------TPSLLSNRP 311

  Fly   512 SPPITQPPSSSSSSNSVAALRDQFRGGAGMSNGAPSPPLPPTPAPSSNPSSASASPKSLLRDNVK 576
            .||..:|||               ||.|        ||.||                        
Mouse   312 PPPAREPPS---------------RGAA--------PPPPP------------------------ 329

  Fly   577 PIILNGGPLNPPAPPPHRSCPPPPPPQRQSSNQDRVKYWIDKTVYSFKKILHINRQGRHSGESVK 641
            |:|.||.          |..||||||.|.                             |..|.  
Mouse   330 PMIRNGA----------RDAPPPPPPYRM-----------------------------HGSEP-- 353

  Fly   642 VINMLNSKRNGGSGSGSAPVPPQRHSSIRPNAPSTPPTHMANASHQFGSSSGLSSGSGAGAAASV 706
                        ...|..|.||.|    .|..|..||.......|:             .:..:|
Mouse   354 ------------PSRGKPPPPPSR----TPAGPPPPPPPPLRNGHR-------------DSITTV 389

  Fly   707 GRLVNDLETKFGKRFHNVTEFPKPPPFLNIQKVYPSRTFKAT-NAP 751
            ...::|.|:|:.  ||.|.:||.|..:.::|:||||:|.:|. .||
Mouse   390 RSFLDDFESKYS--FHPVEDFPAPEEYKHLQRVYPSKTNRAARGAP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vrp1NP_001097406.1 None
Wipf2NP_922922.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 18/39 (46%)
WH2 36..60 CDD:280384 15/24 (63%)
Binds actin. /evidence=ECO:0000255 49..52 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..386 129/652 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..440 8/15 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 77 1.000 Domainoid score I8824
eggNOG 1 0.900 - - E1_KOG4462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.860

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