DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vrp1 and Wipf1

DIOPT Version :9

Sequence 1:NP_001097406.1 Gene:Vrp1 / 37521 FlyBaseID:FBgn0243516 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001276651.1 Gene:Wipf1 / 215280 MGIID:2178801 Length:493 Species:Mus musculus


Alignment Length:781 Identity:185/781 - (23%)
Similarity:244/781 - (31%) Gaps:329/781 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAIPPPPGPPPPP----GPPPPPAMGGLKLGGAGGADARSALLSSIQKGTKLKKTTTVDKSGPAL 61
            |.:||||.|||||    .....|.:...:..|      |:||||.|.||.|||||.|.|:|.|.|
Mouse     1 MPVPPPPAPPPPPTFALANTEKPTLNKTEQAG------RNALLSDISKGKKLKKTVTNDRSAPIL 59

  Fly    62 -----SGKVCGGDGGAGIGAKRTLNNNTSTSNHNNSSSSSNGLGNGTPKLGGLFEGLSQMPKLKP 121
                 :|...||.||.|.|.        .........|..|..|.|.|.|||||:  :.||||  
Mouse    60 DKPKGAGASAGGYGGGGGGG--------GGGGGGGGGSGGNFGGGGPPGLGGLFQ--AGMPKL-- 112

  Fly   122 VNGIRATPSAGSAATTTSKSTTNSSAQQRSNSPP------AATSASNAS--NGPMDFNTELTKHL 178
                              :||.|.......:.||      .||||...|  :||..|......| 
Mouse   113 ------------------RSTANRDNDSGGSRPPILPPGGRATSAKPFSPPSGPGRFPAPSPGH- 158

  Fly   179 TLKRQKQQQQQQPQPPTNNTHINATEANLRTNRGPPPQPPKSANSNDSILERMNIPRTAPTPPFG 243
                    :...|:||              .||.|||:|...:.           |.:.| ||..
Mouse   159 --------RSGPPEPP--------------RNRMPPPRPDVGSK-----------PDSLP-PPVP 189

  Fly   244 NSSSVKAASPTLSDSGSNSSGSGGGSGSVKSKAANLNISLGNSFVNSSKSTVSASTASLNSSLTS 308
            |       :|....|..::.||..|.|:.:..                                 
Mouse   190 N-------TPRPVPSSLHNRGSPAGLGAPRPP--------------------------------- 214

  Fly   309 STGSVRNLAPNKSTLFGGSSG--SSSGSSSGGGYASVHKSSPPSTADSTPSVTPTPPPLQLPMKP 371
                   ...|:...||..|.  :.|||||                       |.|.|   |:.|
Mouse   215 -------FPGNRGAAFGAGSARQNPSGSSS-----------------------PFPRP---PLPP 246

  Fly   372 AISFGKPNFAPKPPGLNQLAMANGQQRPAVTRHHSMKSPRSPPAAGIVNGLVFPTQQHLGTLRGP 436
            ..|....:..|.||             |.|....||.....||.         |:|    |.:.|
Mouse   247 TPSRALDDKPPPPP-------------PPVGNRPSMHREAVPPP---------PSQ----TSKPP 285

  Fly   437 LQFHGSESSSPNTSAGSMRCAPNPPKSRPSVKPPPPPTPARSFSNTNLNNIGGSTMFSAVNTALI 501
            :      .|:|....||....|.||.|||.   |||..||   ||..:..              :
Mouse   286 V------PSTPRPGLGSQAPPPPPPPSRPG---PPPLPPA---SNDEIPR--------------L 324

  Fly   502 QSSAISSQAPSPPITQPPSSSSSSNSVAALRDQFRGGAGMSNGAPSPPLPPTPAPSSNPSSASAS 566
            ....:|..:.:||:..|                  |.:|        ||||.|:.          
Mouse   325 PQRNLSLTSSAPPLPSP------------------GRSG--------PLPPPPSE---------- 353

  Fly   567 PKSLLRDNVKPIILNGGPLNPPAP---PPHRSCP-PPPPPQRQSSNQDRVKYWIDKTVYSFKKIL 627
                               .||.|   ||.||.| |||||                         
Mouse   354 -------------------RPPPPVRDPPGRSGPLPPPPP------------------------- 374

  Fly   628 HINRQGRHSGESVKVINMLNSKRNGGSGSGSAPVPPQRHSSIRPNAPST----PPTHMANASHQF 688
             |||.| .:..::.....|.| |:|.....|.|.||     :.|:.|..    ||....:..:.|
Mouse   375 -INRNG-STARALPATPQLPS-RSGMDSPRSGPRPP-----LPPDRPGAGAPPPPPPSTSVRNGF 431

  Fly   689 GSSSGLSSGSGAGAAASVGRLVNDLETKFGKRFHNVTEFPKPPPFLNIQKVYPSRTFKATNAPGN 753
            ..||                ..::.|::|  .||.:::.|.|.|::...|.|||:..:..:..|:
Mouse   432 QDSS----------------CEDEWESRF--YFHPISDLPPPEPYVPTTKTYPSKLARNESRSGS 478

  Fly   754 S 754
            :
Mouse   479 N 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vrp1NP_001097406.1 None
Wipf1NP_001276651.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..493 185/781 (24%)
WH2_WAS_WASL-1 29..60 CDD:409219 18/36 (50%)
Binds actin. /evidence=ECO:0000250 45..48 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838529
Domainoid 1 1.000 77 1.000 Domainoid score I8824
eggNOG 1 0.900 - - E1_KOG4462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006482
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.790

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