DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plekhm1 and RUBCN

DIOPT Version :9

Sequence 1:NP_611639.1 Gene:Plekhm1 / 37520 FlyBaseID:FBgn0034694 Length:720 Species:Drosophila melanogaster
Sequence 2:XP_006713890.1 Gene:RUBCN / 9711 HGNCID:28991 Length:1012 Species:Homo sapiens


Alignment Length:751 Identity:168/751 - (22%)
Similarity:290/751 - (38%) Gaps:149/751 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TSALCTTLEALFLHGLKDSFLSATFNVIAGDVERRPEPSFWAPCMVFMHKQVIEQVQGLSQITSE 116
            :|.|.:.:||.::....||         .||....||                ....|.......
Human   296 SSTLTSPIEASWVSSQNDS---------PGDASEGPE----------------YLAIGNLDPRGR 335

  Fly   117 TGQCRAWV--RQSLNESVFS-----------SYLNNMRKNG-SALSQYYKRNALMRDSEGLETAA 167
            |..|::..  .:|.:.::||           |.|.:....| |.||...:|::.   ||| :|..
Human   336 TASCQSHSSNAESSSSNLFSSSSSQKPDSAASSLGDQEGGGESQLSSVLRRSSF---SEG-QTLT 396

  Fly   168 KIMESLEAYVQFDL------------PVNSSLLNHWP---------------DYSLQLSDLWTPA 205
            ....:.:::::...            |.|.:::...|               .||.|.|::.||:
Human   397 VTSGAKKSHIRSHSDTSIASRGAPGGPRNITIIVEDPIAESCNDKAKLRGPLPYSGQSSEVSTPS 461

  Fly   206 LKSCPISSGVDVASSLGSDIIAIPTPQPLQTNELFSESISNSPFG-------RNSNFGVPE---- 259
            ........|..:.|..|.      ..:|.:...|.| .:|...||       .|::|.:.|    
Human   462 SLYMEYEGGRYLCSGEGM------FRRPSEGQSLIS-YLSEQDFGSCADLEKENAHFSISESLIA 519

  Fly   260 LSQRENLDLLIQKFDEMDVINEEQTGGDKAETNETAE---------------QEAPSG------S 303
            ..:....:::.|..:|.:| .||.:..:..|..:...               |||..|      |
Human   520 AIELMKCNMMSQCLEEEEV-EEEDSDREIQELKQKIRLRRQQIRTKNLLPMYQEAEHGSFRVTSS 583

  Fly   304 KTRSRKKSNRQMDSSSFADLDLEAPSLLPQGSNSLSNLMQTSWSGDLEATPTSPTEELTGSRFFQ 368
            .::...:.:.|:..|..||   |......|..:..|||...|.:| |..:..|    :......:
Human   584 SSQFSSRDSAQLSDSGSAD---EVDEFEIQDGSEGSNLTHISKNG-LSVSLAS----MFSDADIR 640

  Fly   369 RSVSVSSSVSLRSPTTDRCSYNALLRKHESNRESGA-GWSEIWEKFR-ASASNLNVAQPQRDTDP 431
            |:.:.||...:.|.:...|..      |.::.|:.| |..:.:|..: .:||.|....|:.|...
Human   641 RNTASSSKSFVSSQSFSHCFL------HSTSAEAVAMGLLKQFEGMQLPAASELEWLVPEHDAPQ 699

  Fly   432 ---------PISEDLSDLQSLDTNSEFELLTSEFDMVELQQMVAQLC-----QLAREPGLDAQGF 482
                     |||.|  |.|..|.   ::|.......:|......|:.     ...|:..:..|.:
Human   700 KLLPIPDSLPISPD--DGQHADI---YKLRIRVRGNLEWAPPRPQIIFNVHPAPTRKIAVAKQNY 759

  Fly   483 LCKSCQHPLGIGY-SNFQVCAFSGSYYCNSCMDVEMQLIPARIIYNWDFRKYSVSKRAATFLAEF 546
            .|..|.......| ...:.|.:.|.|:|..|.:.....||:|::..|||.||.||..:...|.:.
Human   760 RCAGCGIRTDPDYIKRLRYCEYLGKYFCQCCHENAQMAIPSRVLRKWDFSKYYVSNFSKDLLIKI 824

  Fly   547 RSHPFLDMQLLNPRIYFASDAMAELQSLRIRLNFIRAYLYTCAPSSIELLQNQFAGREYLYEHIH 611
            .:.|..::|.:|..:|.....:.:::.||::|..::....||..:. |||.:......:|.|.:|
Human   825 WNDPLFNVQDINSALYRKVKLLNQVRLLRVQLCHMKNMFKTCRLAK-ELLDSFDTVPGHLTEDLH 888

  Fly   612 LYSIADLALIQRGVLCQQLQKAFKLGEAHVLKCRLCHLKGFICEICQS-PRVLYPFHISTTFRCL 675
            |||:.||...::|.|..:|.:..:.|..||.:|.||..||||||.||: ..:::||.:.....|.
Human   889 LYSLNDLTATRKGELGPRLAELTRAGATHVERCMLCQAKGFICEFCQNEDDIIFPFELHKCRTCE 953

  Fly   676 ACGAVFHAECLNEKQPCPKCERIRKREDQGLQEAVQ 711
            .|.|.:|..|. :...||:|||::.|.:...:::::
Human   954 ECKACYHKACF-KSGSCPRCERLQARREALARQSLE 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Plekhm1NP_611639.1 RUN 54..185 CDD:280855 27/156 (17%)
zf-RING_9 500..700 CDD:290612 65/200 (33%)
RUBCNXP_006713890.1 RUN 122..182 CDD:214736
zf-RING_9 777..977 CDD:290612 65/201 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165144813
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1829
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177737at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

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