DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plekhm1 and AT3G48195

DIOPT Version :9

Sequence 1:NP_611639.1 Gene:Plekhm1 / 37520 FlyBaseID:FBgn0034694 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_680104.1 Gene:AT3G48195 / 823976 AraportID:AT3G48195 Length:938 Species:Arabidopsis thaliana


Alignment Length:666 Identity:136/666 - (20%)
Similarity:258/666 - (38%) Gaps:159/666 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SETGQCRAWVRQSLNESVFSSYLNNMRKNGSALSQY---------YKRNALM---RDSEGLETAA 167
            |..|.|      .|::.|.|..|:...::|...:.:         ..:|:.|   |||..:..|:
plant   335 SSGGVC------DLDDDVSSGLLHESSEDGKQSNPFGECTSEPLLASQNSDMPSSRDSHPVTNAS 393

  Fly   168 KIMESLEAYVQFDLPVNSSLLNHWPDYSLQLSDLWTPALKSCPISSGVDVASSLGSDIIAIPTPQ 232
            |:     .|.| ....|:.|.:.:.|:...:.::    |.....||||..:              
plant   394 KV-----TYTQ-PKKENTELNDFYDDFVHDMEEI----LLDSGESSGVRFS-------------- 434

  Fly   233 PLQTNELFSESIS--NSPFGRNS-----NFGVPELSQRENLDLLIQKFDEMDVINEEQTGGDKAE 290
              :.:::|...:|  |...|:.:     :...|.:|||       .:.|.::|:..:|..||.:.
plant   435 --KNDKMFQLQLSLPNRDGGQTATTSGLDDSSPTVSQR-------FRIDRVEVVGVKQKKGDVSL 490

  Fly   291 TNETAEQE--------APSGSKTRSRKKSNRQMDS------SSFADLDLEAPSLLPQGSNSLSNL 341
            :......:        ..||......::..|...|      |.|||.....|:...........:
plant   491 SERLVGVKEYTVYVIRVWSGKDKWEIERRYRDFYSLYRRLTSLFADQGWTLPTPWTSVERESRKI 555

  Fly   342 MQTSWSGDLEATP--TSPTEELTGSRFFQRSVSVSSSVSLRSPTTDRCSYNALLRKHESNRESGA 404
            ..||.:...|.|.  ......:..||||              ||..    ||||| ..|.:::  
plant   556 FGTSPNAVAERTVLIQDCLNSVLQSRFF--------------PTLP----NALLR-FLSPQDA-- 599

  Fly   405 GWSEIWEKFRASASNL-NVAQPQRDTDPPISEDLSDLQSLDTNSEFELLTSEFDMVELQQMVAQL 468
                     .|::|.| ::..|...         :.:.:..|:|.:....|....:...:.|.||
plant   600 ---------YANSSGLDSIVSPTGS---------AAIDAATTSSSYGNTISFIVDIRPHKSVKQL 646

  Fly   469 CQLAREPGLDAQGFLCKSCQHPL------------GIGYSNFQVCAFSGSYYCNSCMDVEMQLIP 521
                    |:||.::|..|....            .:|:...::|.::|..:|:||...:|.::|
plant   647 --------LEAQHYICAGCHRYFDDGATLVRDFVKALGWGKPRLCEYTGHLFCSSCHTNDMAVLP 703

  Fly   522 ARIIYNWDFRKYSVSKRAATFLAEFRSHPFLDMQLLNPRIYFASDAMAELQSLRIRLNFIRAYLY 586
            |.::::|||.:|.||:.|.::|......|.|.:..:||.:.....|:..:.|:|.|:..:..|: 
plant   704 ATVLHHWDFNRYPVSQLAKSYLDSIHEQPMLCVSAVNPFLSSKVPALNHIMSIRKRITIMLPYV- 767

  Fly   587 TCAPSSIELLQNQFAGREYLYEHIHLYSIADLALIQRG------VLCQQLQKAFKLGEAHVLKCR 645
            .| |.. :.|....:.|.||.|....:::.||..:.:|      .:.:.:::  |:.|....:|.
plant   768 RC-PFQ-KTLYKGLSSRRYLLESSEFFALRDLIDLSKGPFAALPAIVETVRR--KILEHITEQCL 828

  Fly   646 LCHLKGFICEICQ----SPRVLYPF----HISTTFRCLACGAVFHAECLNEKQPCPKCERIRKRE 702
            :|...|..|...|    :..:::||    .:|   :|..||:|||.:||:....|....:::..:
plant   829 VCCDVGVPCNARQACDDTSSLIFPFQEKDEVS---KCRLCGSVFHKKCLSRLSNCHCGAQLKPNK 890

  Fly   703 DQGLQEAVQCLKQKNE 718
            :.|   .:|..::|::
plant   891 NPG---ELQVSEKKSD 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Plekhm1NP_611639.1 RUN 54..185 CDD:280855 17/81 (21%)
zf-RING_9 500..700 CDD:290612 54/213 (25%)
AT3G48195NP_680104.1 PX_domain 476..595 CDD:132768 28/137 (20%)
zf-RING_9 681..887 CDD:290612 54/213 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 97 1.000 Domainoid score I2433
eggNOG 1 0.900 - - E1_KOG1829
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm3402
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12326
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.870

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