DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plekhm1 and RUBCNL

DIOPT Version :10

Sequence 1:NP_611639.1 Gene:Plekhm1 / 37520 FlyBaseID:FBgn0034694 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_079389.2 Gene:RUBCNL / 80183 HGNCID:20420 Length:662 Species:Homo sapiens


Alignment Length:704 Identity:170/704 - (24%)
Similarity:273/704 - (38%) Gaps:172/704 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 PCM----VFMHK-------QVIEQVQGL-SQITSETGQCRAWVRQSLNESVFSSYLNNMRKNGSA 146
            ||.    :..||       .|.:|.|.| ||:.:.......:|..:.:.|         ..:.|.
Human    39 PCQLDIRLMRHKAVWINPQDVQQQPQDLQSQVPAAGNSGTHFVTDAASPS---------GPSPSC 94

  Fly   147 LSQYYKRNALMRDSEGLETAAKIMESLEAYVQFDLPVNSSLLNHW--PDYSLQLSDLWTPALKSC 209
            |........|..|:.....:|....|.|....|.|   ||...|.  |.||.::         |.
Human    95 LGDSLAETTLSEDTTDSVGSASPHGSSEKSSSFSL---SSTEVHMVRPGYSHRV---------SL 147

  Fly   210 PISSGVDVASSLGSDIIAIPTPQPLQTNELFSE-------------SISNSPFGRNS----NFGV 257
            |.|.|: :|:|          |.| :|:..|.|             .:|......||    .|.:
Human   148 PTSPGI-LATS----------PYP-ETDSAFFEPSHLTSAADEGAVQVSRRTISSNSFSPEVFVL 200

  Fly   258 PELSQREN-----LDLLIQKFDEM--DVINEEQT-----------GGDKAETNET----AEQEAP 300
            |...::||     .|::|...::|  ::::::||           |.|:.::..|    .:||  
Human   201 PVDVEKENAHFYVADMIISAMEKMKCNILSQQQTESWSKEVSGLLGSDQPDSEMTFDTNIKQE-- 263

  Fly   301 SGSKTRSRK--------------KSNRQMDSSSFADLDLEAPSLLPQGS-NSLSNLMQTSWSGDL 350
            |||.|.|..              ::....|.......|::...:|..|. |.::.....|.|...
Human   264 SGSSTSSYSGYEGCAVLQVSPVTETRTYHDVKEICKCDVDEFVILELGDFNDITETCSCSCSSSK 328

  Fly   351 EAT--PTSPTEELTGS---RFFQRSVSVSSSVSLRSPTTDRCSYNALLRKHESNRESGAGWSEIW 410
            ..|  |...:.||...   |.||                 :|...:::....:...|.||...:.
Human   329 SVTYEPDFNSAELLAKELYRVFQ-----------------KCWILSVVNSQLAGSLSAAGSIVVN 376

  Fly   411 EKF--RASASNLNVAQP---------QRDTDPPISEDLSDLQSLDTNSEFELLTSEFDMVELQQM 464
            |:.  :...|::||.|.         ..|..||               .|:::.:....::...:
Human   377 EECVRKDFESSMNVVQEIKFKSRIRGTEDWAPP---------------RFQIIFNIHPPLKRDLV 426

  Fly   465 VAQLCQLAREPGLDAQGFLCKSCQHPLGIGY-SNFQVCAFSGSYYCNSCMDVEMQLIPARIIYNW 528
            ||            ||.|.|..|..|:...: ...:.|.:.|.|:|:.|.......|||||:..|
Human   427 VA------------AQNFFCAGCGTPVEPKFVKRLRYCEYLGKYFCDCCHSYAESCIPARILMMW 479

  Fly   529 DFRKYSVSKRAATFLAEFRSHPFLDMQLLNPRIYFASDAMAELQSLRIRLNFIRAYLYTC--APS 591
            ||:||.||..:...|......|..::..:...:|..:..:..::.::.:|..|:..|.||  |.|
Human   480 DFKKYYVSNFSKQLLDSIWHQPIFNLLSIGQSLYAKAKELDRVKEIQEQLFHIKKLLKTCRFANS 544

  Fly   592 SIELLQNQFAGREYLYEHIHLYSIADLALIQRGVLCQQLQKAFKLGEAHVLKCRLCHLKGFICEI 656
            :::..: |..|  :|.:.:||:|:.||..|::|:|...|:...|...|||..|.||..||||||.
Human   545 ALKEFE-QVPG--HLTDELHLFSLEDLVRIKKGLLAPLLKDILKASLAHVAGCELCQGKGFICEF 606

  Fly   657 CQSPRVLYPFHISTTFRCLACGAVFHAECLNEKQPCPKCERIRKREDQGLQEAV 710
            ||:..|::||..:|..||.||.|.||.:|....: ||:|.||..|  :.|.|:|
Human   607 CQNTTVIFPFQTATCRRCSACRACFHKQCFQSSE-CPRCARITAR--RKLLESV 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Plekhm1NP_611639.1 RUN_PLEKHM1 20..191 CDD:439041 23/108 (21%)
zf-RING_9 500..700 CDD:464030 71/201 (35%)
RUBCNLNP_079389.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..131 17/84 (20%)
Interaction with UVRAG. /evidence=ECO:0000269|PubMed:28306502 196..235 8/38 (21%)
zf-RING_9 450..649 CDD:464030 71/202 (35%)
Blue background indicates that the domain is not in the aligned region.

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