DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Plekhm1 and plekhm1

DIOPT Version :9

Sequence 1:NP_611639.1 Gene:Plekhm1 / 37520 FlyBaseID:FBgn0034694 Length:720 Species:Drosophila melanogaster
Sequence 2:NP_001314780.1 Gene:plekhm1 / 564048 ZFINID:ZDB-GENE-030131-2752 Length:1058 Species:Danio rerio


Alignment Length:1076 Identity:223/1076 - (20%)
Similarity:361/1076 - (33%) Gaps:425/1076 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NAREIEFEVKQKSLEVLGVCE---------------QTSALCTTLEALFLHGLKDSFLSATFNVI 79
            :|::::..:|.|....|...:               :.:.||..|||:|:||:|..|:.:.    
Zfish    12 DAKDVKQWIKGKIAHTLKALQKRYITTDTAVTSEDLEANLLCCALEAVFIHGIKSKFIRSD---- 72

  Fly    80 AGDVER------RPEPSFWAPCMVFMHKQVIEQVQGLSQITSETGQCRAWVRQSLNESVFSSYLN 138
            .|.|.:      .|:|.|||......|:.|:::::.||.|.|:.|:||||||.:||:.:...||.
Zfish    73 GGQVRKGGSRGALPQPVFWALLKTVTHRDVVQELERLSFINSDVGRCRAWVRLALNDGLLECYLT 137

  Fly   139 NMRKNGSALSQYYKRNALMRDSEGLETAAKIMESLEAYVQFDLPVNSSLLNHWPDYSLQLSDL-- 201
            ::.:..|.:|.||:..||:.|.|..|....:::.| |.:.|.|...|::||.|.:..|.|:.|  
Zfish   138 SLLRENSKMSTYYQPGALLLDPEDREVLLTLLQGL-ASLTFQLSYKSAVLNEWTNTPLVLAGLCP 201

  Fly   202 -------------------------------WTP----------ALKSC--------------PI 211
                                           |||          .:..|              .:
Zfish   202 PTPADEQHLGPKRKESWDTVSQSSGGSGGSDWTPESLQRETRRDQIDGCDPSTPLTSSNLSLDTV 266

  Fly   212 SSGVDVASSLGSDIIAIPTPQPLQTNELFSES----ISNSPFGRNSN---FGVPELSQRENLDLL 269
            |....::|||.||.:       ||..||.|..    ..:|....|..   ....|...:|::|:.
Zfish   267 SGSSHLSSSLSSDSL-------LQGQELRSPEKERWSCDSEINHNEQQKITATEESLMKEDIDVF 324

  Fly   270 IQKFDEM-------------------------DVINEEQTGGDKAETNETAEQEAP--------- 300
            |...|.:                         ..|.|:.......||.|...:|:.         
Zfish   325 IPAPDNLTDTHSVNEHTHIPDASLTSAQDTHHSHITEQSVENISVETKEETIEESEIIVKSTRLK 389

  Fly   301 ---SGSKTRSRKKSNRQMDSSSFADLDLEAPSLLPQGSNSLSNLMQTSWSGD--------LEATP 354
               :.|:|..::|.....|||      ::.|        |:|.|.:|..:.|        :.|.|
Zfish   390 AKNTVSETAEKEKKRESRDSS------VDPP--------SVSALTETEETPDPKDTVLSEISAAP 440

  Fly   355 TSPTEELTGSRFFQRSVSVSSSVSLRS----------------------------------PTTD 385
             ||.|....:...:.::|||..:|..|                                  |...
Zfish   441 -SPVETPQHAACRRTTMSVSRKISTDSLYSSCKSTSWISEEDFHKPEDLSISEAYAIIDVTPMNG 504

  Fly   386 RCS-------------------------YNALLRKHESNRESGAG-------------------- 405
            :.|                         :..||:..:..|.|..|                    
Zfish   505 QVSPVCEADELQPPPSVVHRRHNGLPNPFRGLLKLGQLERRSAVGMWWDYYCELSPFELRLYVNA 569

  Fly   406 ------------------------------------------------W---------------- 406
                                                            |                
Zfish   570 EERVCNENLSLLRCEDIHLYSSTEGRFRLTFPNKRIYLRAPSKGEAEDWVDRITEAVNKLRPIMR 634

  Fly   407 SEIWEKFRASASNLNVAQPQRDT---------DPP------------------------------ 432
            .|.||....| |:..|..|...|         |||                              
Zfish   635 DEQWEVLHTS-SDQEVTSPAPSTPEHTISELPDPPQLDWTRHKDPEPDAIKEAVVYQSLEEKGWR 698

  Fly   433 ---------------ISED------------LSDL---QSLDTNSEFELLTSEFDMVELQ----- 462
                           :.||            :.|:   .||.:.:.|::||.. |.:.|:     
Zfish   699 CLVLSLSLEILRGFQVREDSKTPLFSLPIGSIRDVVPDVSLGSPAFFKVLTVR-DTLTLRAESGE 762

  Fly   463 -------------------------------------------------QMVAQLCQLAREPGLD 478
                                                             :::..|..:..|.|||
Zfish   763 EARGWRSLIRGALDSYLETEDDGAGASAADGAQGGVVHKLVQHRLKGDGELLLHLSVVPIERGLD 827

  Fly   479 AQGFLCKSCQHPLGIGYSNFQVCAFSGSYYCNSCMDVEMQLIPARIIYNWDFRKYSVSKRAATFL 543
            ||.:.|..|...:|:.....::|.|||..:|:||...:|.:||:|:::|||.:...||::|...|
Zfish   828 AQNYRCAGCSRQIGVSLGRGRLCEFSGQQFCDSCHQGDMSIIPSRMLHNWDLKTREVSRQAFKLL 892

  Fly   544 AEFRSHPFLDMQLLNPRIYFASDAMAELQSLRIRLNFIRAYLYTCAPSSIELLQNQFAGREYLYE 608
            .:....|.|::.:|||.::..:|.||::|:||.||.|:..|:..|.....:.:|.:...|.||.:
Zfish   893 TQIEHEPLLNLAVLNPELFEHADIMAKVQNLRQRLRFLGDYVLLCRSGFSKQIQPRLQQRTYLLD 957

  Fly   609 HIHLYSIADLALIQRGVLCQQLQKAFKLGEAHVLKCRLCHLKGFICEICQSPRVLYPFHISTTFR 673
            :..:||:.||..|..|.....||...:.|..||..|.||..:||||:||.:|.:::||....|.|
Zfish   958 NSDVYSVLDLQQIADGHYESYLQSLIQFGSKHVHNCDLCTQRGFICQICNAPDIIFPFQFDVTSR 1022

  Fly   674 CLACGAVFHAECLNEKQPCPKCERIRKREDQGLQEA 709
            |..|..|||:.|..:...||:|.|.:|..::.|:|:
Zfish  1023 CNVCKTVFHSSCRAQCPVCPRCIRKQKYLERDLEES 1058

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Plekhm1NP_611639.1 RUN 54..185 CDD:280855 47/136 (35%)
zf-RING_9 500..700 CDD:290612 73/199 (37%)
plekhm1NP_001314780.1 RUN 52..181 CDD:308412 47/133 (35%)
PH-like 505..631 CDD:327399 7/125 (6%)
PH-like 684..767 CDD:327399 10/83 (12%)
zf-RING_9 849..1046 CDD:316423 72/196 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577999
Domainoid 1 1.000 92 1.000 Domainoid score I7621
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 295 1.000 Inparanoid score I2738
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177737at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26096
orthoMCL 1 0.900 - - OOG6_109012
Panther 1 1.100 - - LDO PTHR12326
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6907
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.900

Return to query results.
Submit another query.