Protein Alignment Plekhm1 and rubcnl

DIOPT Version :10

• Sequence 1: NP_611639.1
• Gene: Plekhm1 / 37520
• FlyBaseID: FBgn0034694
• Length: 720
• Species: Drosophila melanogaster
• Sequence 2: XP_073768824.1
• Gene: rubcnl / 561574
• ZFINID: ZDB-GENE-070912-256
• Length: 630
• Species: Danio rerio
• Alignment Length: 676
• Identity: 167/676 - (24%)
• Similarity: 262/676 - (38%)
• Gaps: 133/676 - (19%)

  Fly   110 LSQITSETGQCRAWVRQSLNESVFSSYL-------NNMRKNGSALSQYYKRNALMRDSEGLETAA 167
            |.|......|..|..|.:..:..|:.:|       :|...:.....:..:.|.: |:||..|..:
Zfish     7 LMQRVEHRSQAYAGSRSTTGDLHFAKWLVDWENPPSNPTDDDDDEEEEEEENDI-RESEVKECNS 70

  Fly   168 KIMESLEAYVQFDLPVNSSLLNHWPDYSLQLSDLWTPALKSCPISSGVDVASSLGSDIIAIPTPQ 232
            .:.|           .:|..||....|.|..|   :|.:  |......|.....|..:    ||
Zfish    71 PVSE-----------CDSDFLNPDEQYHLPRS---SPVI--CRKRPNTDTQKQCGLSV----TP- 114

  Fly   233 PLQTNELFSESISNSPFGRNSNFGVP----ELSQRENLDLLIQKFDEMD----------VINEEQ 283
            ||.       .||.|| |..||...|    ||.:.||    .:.|||.|          ::.::|
Zfish   115 PLW-------EISTSP-GLKSNASSPHRLEELRRSEN----ERNFDECDSLQGSSRQMLLLTDKQ 167

  Fly   284 TGGDKAETN-----------------ETAEQEAPSGSKTRSRKKSNR------------------ 313
            .|...:..:                 |..::.|.|.....:||.|::
Zfish   168 HGTRISHVSQDTQFHSLPFFSGRLHEELTKRRACSDIPQINRKSSDQAKHWPFVIGDSNEDINSL 232

  Fly   314 QMDSSSFADLD-----LEAPS---LLPQGSNSLSNLMQTSWSGDLEATPTSPTEEL--TGSRFFQ 368
            ..:::.|..:|     |||..   .|.|.:|:..|....     .|...||.|:.:  :.|.|.:
Zfish   233 DQENAHFVVVDMLLEVLEAVKWAVCLQQSNNTNPNNRDR-----CETHDTSKTDSIASSDSGFEE 292

  Fly   369 RS--VSVSSSVSLRSPTTDRCSYNALLRKHESNRESGAGW--SEIWEKFRASASNLNVAQPQRDT 429
            .|  .|::|..|....:..:|:...|  .|....|....|  ||:.:    :..|||.|. |...
Zfish   293 NSERYSLASFQSCLQSSRTQCTAENL--AHRLVSEFRKQWFSSELLK----NPVNLNSAL-QEVL 350

  Fly   430 DPPISED---LSDLQSLDT--NSEFELLTSEFDMVELQQMVAQLCQLAREPGLDAQGFLCKSCQH 489
            .|.:|.:   ||:...:.|  ...|......|.::...|...:     |...:.:|.|||..|..
Zfish   351 FPIMSGERISLSEEIMMKTRMRGTFSWAPPRFQIIFCVQPTHR-----RSDVIASQHFLCAGCGT 410

  Fly   490 PLGIGY-SNFQVCAFSGSYYCNSCMDVEMQLIPARIIYNWDFRKYSVSKRAATFLAEFRSHPFLD 553
            .:...| ...:.|.:.|.|:|:.|......:||.|::.||||.:|.|...:...|......|...
Zfish   411 EIEARYMKKLRYCDYLGRYFCDGCHGGLETVIPGRVLNNWDFARYPVCNFSRQLLDSIWEQPIFK 475

  Fly   554 MQLLNPRIYFASDAMAELQSLRIRLNFIRAYLYTCAPSSIELLQNQFAG-REYLYEHIHLYSIAD 617
            :..:...:|..:..:...:.|:.:|..|:..|.||..|:..|  ::|.. ..:|.:.:||:|:.|
Zfish   476 LTSVAKNLYSQAKELQRFRELQEQLISIKKLLSTCRLSAGVL--DEFEQLPAHLMQDLHLFSMDD 538

  Fly   618 LALIQRGVLCQQLQKAFKLGEAHVLKCRLCHLKGFICEICQSPRVLYPFHISTTFRCLACGAVFH 682
            |..:::|.||...:...:...||:..|.||..||||||.|....||:||...|..||..|.|.||
Zfish   539 LHRVKKGQLCAVAKALLQSSVAHIDFCELCQAKGFICEFCHGKEVLFPFQRDTCTRCQDCRACFH 603

  Fly   683 AECLNEKQPCPKCERIRKREDQGLQE 708
            ..|..: :.||||.|::||:.  |||
Zfish   604 ISCFRD-ESCPKCARLQKRKK--LQE 626

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Plekhm1	NP_611639.1	RUN_PLEKHM1	20..191	CDD:439041	17/87 (20%)
		zf-RING_9	500..700	CDD:464030	64/200 (32%)
rubcnl	XP_073768824.1	None