DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plekhm1 and rubcn

DIOPT Version :9

Sequence 1:NP_611639.1 Gene:Plekhm1 / 37520 FlyBaseID:FBgn0034694 Length:720 Species:Drosophila melanogaster
Sequence 2:XP_031757906.1 Gene:rubcn / 100497647 XenbaseID:XB-GENE-990005 Length:933 Species:Xenopus tropicalis


Alignment Length:925 Identity:193/925 - (20%)
Similarity:328/925 - (35%) Gaps:313/925 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LCTTLEALFLHGL---------KD--SFLSATFNVIAG---DVERRPEPSFWAPCMVFMHKQVIE 105
            ||..:.::|.|||         ||  :|:.::..:..|   .||:         .::|     .|
 Frog    47 LCRDMSSIFQHGLICDQVYCKQKDYWNFVKSSQRLHPGTSPQVEQ---------FLLF-----FE 97

  Fly   106 QVQGLSQITSETGQCRAWVRQSLNESVFSSYLNNMRKNGSALSQYYKRNALMRDSEGLETAAKIM 170
            ..|...:..||....:.|::.||.....|:.|..:..|.....::|..:|.:.....:....:.:
 Frog    98 NSQRNCENISEKDNGKLWLQHSLQFHCLSAQLKALLGNRQYTRKFYSESAFLLSEAHVAAMFQCL 162

  Fly   171 ESLE-------AYVQFDLPVNSSLLNHWPDYSLQLSDLWTPALKSCPISSGVDVASSLGSDIIAI 228
            |::|       |.:...:......|| ..:.||.||.|        |.|:|:....:        
 Frog   163 EAVEQNNPRLLAQIDTSVLAGKRQLN-ISEKSLSLSTL--------PGSTGIPYTDN-------- 210

  Fly   229 PTPQPLQTNELFSESISNSPFGRNSNFGVPE-------LSQRENLDLLIQKFD------------ 274
             ||..|.::....:|.|       |:|.:.:       :|:.|::.:.:...|            
 Frog   211 -TPHSLYSSYSSLQSFS-------SDFRIDQQNNLYRAVSENESIIVSVAPADDSPPHEAFSPVS 267

  Fly   275 EMDVINEEQTGGDKAETNETAEQEAPSG------------SKTRSRKKSN------RQMDS---- 317
            ||.|........| |.:.|....||..|            |.::|.:.||      ::.||    
 Frog   268 EMSVSTLTSQSED-AGSPEDPHSEADDGPEYLAIGNMSRRSSSQSSESSNLFSCNSQKTDSLNST 331

  Fly   318 ---------------SSFADL------------------DLEAPSLLPQGSN-SLSNLMQ----T 344
                           |||:::                  |.......||||: ::|.:|:    .
 Frog   332 PTAPQNTCLLSVPRRSSFSEIQFGNGPWHTKKSHMRSRSDTNVTIGKPQGSDRNISIIMEDPAAE 396

  Fly   345 SWSGDLEATPT---------SP------------------------------TEELTGS------ 364
            |.|| |...|.         ||                              :|:..||      
 Frog   397 SHSG-LRNNPALLGKNKAIGSPYIEHDSAPYLNTAEGVFRRPSKGQSLISYLSEQDFGSCADLEK 460

  Fly   365 --RFFQRSVSVSSSVSLRSPTTDRCSYNALLRK-HESNRESGAGWSEIWEKFRASASNL------ 420
              ..|..|.|:.:::.|.     :|  |.:.|: .|...:|.....|:.:|.|.....:      
 Frog   461 ENAHFSISESLIAAIELM-----KC--NMISRQLQEEEEDSDREIRELKQKIRLRRQQIRSCRNQ 518

  Fly   421 -------NVAQPQRDTDPPISE----DLSDLQSLDTNSEFELLTSE------------------- 455
                   :.:|...::...||.    .:|:..|.|...::|:..||                   
 Frog   519 SAYTEGGSSSQGMTESGSQISSHESIPVSESSSADEVDQYEIKDSEIKRGLNSHHLQCTESMSHS 583

  Fly   456 -----------------FDMVEL----------------QQMV---------------AQLCQL- 471
                             |:.::|                |:::               |.:.:| 
 Frog   584 FLCSNSAEAVAMGLLKQFEGMQLPAASELEWLVPEHDAPQKLLPIPDSVPISPDDGEHADIYKLR 648

  Fly   472 ------------------------AREPGLDAQGFLCKSCQHPLGIGY-SNFQVCAFSGSYYCNS 511
                                    .::..:..|.:.|..|...:...| ...:.|.:.|.|:|..
 Frog   649 IRVRGNLEWAPPRPQIIFNIHTAPTKKAAVTKQNYRCAGCGIRIESDYIKRLRYCEYLGKYFCQC 713

  Fly   512 CMDVEMQLIPARIIYNWDFRKYSVSKRAATFLAEFRSHPFLDMQLLNPRIYFASDAMAELQSLRI 576
            |.:....:||.|||..|||.||.||..:...|.:..|.|..::|.:|..:|....|:.:::.|||
 Frog   714 CHENAQSVIPGRIIRKWDFSKYYVSNFSKDLLTKIWSDPLFNLQDINSPLYRKVKALEQVRLLRI 778

  Fly   577 RLNFIRAYLYTC--APSSIELLQNQFAGREYLYEHIHLYSIADLALIQRGVLCQQLQKAFKLGEA 639
            :|..::....||  |...:| |.:...|  :|.|..||:|::||..|::|.|..:|:...|.|..
 Frog   779 QLVHLKNMFKTCRLAKGILE-LYDIVPG--HLTEDHHLFSLSDLTSIKKGELVPRLRDLVKSGAL 840

  Fly   640 HVLKCRLCHLKGFICEICQS-PRVLYPFHISTTFRCLACGAVFHAECLNEKQPCPKCERIRKRED 703
            ||.||.||..||||||.||: ..|::||.::...||..|.|.:|..|...:: ||||||:|.|.|
 Frog   841 HVEKCMLCQAKGFICEFCQNEDDVIFPFELNKCRRCEDCKACYHKYCFRSEE-CPKCERLRARRD 904

  Fly   704 QGLQEAVQCLKQKNE 718
            ...:::::......|
 Frog   905 LLAKQSLESYNSDQE 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Plekhm1NP_611639.1 RUN 54..185 CDD:280855 28/150 (19%)
zf-RING_9 500..700 CDD:290612 76/202 (38%)
rubcnXP_031757906.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177737at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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