DRSC/TRiP Functional Genomics Resources

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Protein Alignment Plekhm1 and plekhm1

DIOPT Version :9

Sequence 1:NP_611639.1 Gene:Plekhm1 / 37520 FlyBaseID:FBgn0034694 Length:720 Species:Drosophila melanogaster
Sequence 2:XP_002933223.2 Gene:plekhm1 / 100491541 XenbaseID:XB-GENE-6033729 Length:1061 Species:Xenopus tropicalis


Alignment Length:1067 Identity:233/1067 - (21%)
Similarity:359/1067 - (33%) Gaps:392/1067 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LINTLNENAREIEFEVKQK-------SLEVLGV------------CEQTSALCTTLEALFLHGLK 68
            |.:..:|||:|.: ||||:       ||..|.:            .:..:|||..|||:|:||||
 Frog     2 LSSLTSENAQEPK-EVKQRITKKLATSLRALQIRYVTTDDVVTSDDDDANALCVALEAVFIHGLK 65

  Fly    69 DSFLSATFNVIAGDVERR-----------PEPSFWAPCMVFMHKQVIEQVQGLSQITSETGQCRA 122
            ..|:.|       ..::|           |:|::||......|:.||.:::.:|.|.::.|:||:
 Frog    66 PKFIKA-------QTDKRNRRYKGRHVPLPQPAYWALLKAVTHRNVITELERVSYINTDVGRCRS 123

  Fly   123 WVRQSLNESVFSSYLNNMRKNGSALSQYYKRNALMRDSEGLETAAKIMESLEAYVQFDLPVNSSL 187
            |:|.:||:.:...|..::::..|.|::||:..||:.|:|..:.....::.. |.:.|.|...||:
 Frog   124 WLRLALNDCLMECYFISLQREKSWLTEYYQPFALLLDAEDCDVVLSYLQGF-ASLTFSLSYKSSI 187

  Fly   188 LNHWPDYSLQLSDLW-------------TPALKS----CPISSGVDVASSLGSDIIA-IPTPQPL 234
            ||.|....|.|:.||             |...||    ...||..|..|||.|:... :.:|..|
 Frog   188 LNEWTATPLSLAGLWLDDSDRFTNGQYETHRRKSLDSVSQSSSSDDTNSSLLSESKGKMDSPLNL 252

  Fly   235 QTNEL---FSESISNSPF--GRNSNFGVPELSQRENLDLLIQKFDEMDVINEEQTGGD------- 287
            .||..   ||.|:|:...  .|.::.|:...|:..:.|....:.:|.|..:.|::..|       
 Frog   253 DTNSASLQFSSSLSSEGLLHNRTTSSGIHSGSENSSCDADSAEMEESDKSHAEESEFDVSLLSGR 317

  Fly   288 -----------KAETNETAEQEAPSGSKTRSR--KKSNRQMDSSSFADL-----DLEAPS----- 329
                       ..|.....|:..|.|.|.:..  .|.....:.:..|||     .::|||     
 Frog   318 NSPTVFLPTPHSGEVVSQPEKTTPQGIKCQGELDVKETPLTECAIKADLITPPASIKAPSSSLCT 382

  Fly   330 --------------------------------LLPQG---SNSLSNLMQTSWSGD---------- 349
                                            ..|:.   .|.:..|.|.:...|          
 Frog   383 RSDKPSAPPEQPNPVICQNPTTEESHRGPTFKTSPENDAHENQIDKLPQAAQINDQADGCIYDKG 447

  Fly   350 ----LEATPTSPTE----------------------ELTGSRF------FQR-SVSVSSSVSLRS 381
                |||.|.|...                      ||..||.      ||| .:|:.:..:|.:
 Frog   448 CSQALEAPPASLASVTSVSKDKSGVCLSVPEHPIVAELPKSRSWISEDDFQRPELSLPTESTLSA 512

  Fly   382 PT--------------------------------------------------------------- 383
            |:                                                               
 Frog   513 PSIPSQPPSSEISDLSQVNKAFNVVHRRQIGLSNPFRGLLMMGDLERRALGMYKSFYCELTPIEF 577

  Fly   384 ------TDR-CSYNALLRKHES------------------------NRESGAGW----------- 406
                  .|| |..|..|.:.||                        :|:....|           
 Frog   578 RMFLKGEDRVCLENCTLIRCESVGPVQSDGRFDLNFPAKRFHLRAPSRDEAQDWVDRIREALQKC 642

  Fly   407 ----SEIWEKFR-----ASASNLNVAQPQRDTDPPIS---------------------------- 434
                .:.||..:     .:.....:..|||....|:.                            
 Frog   643 RPQKDDTWEVLQFPDPPKTGQESPLLSPQRSPSSPVGSIKTESFDWVCPLKLEPDALKESVLYMK 707

  Fly   435 --------------------------------------EDLSDLQSLDTNSEFELLTSEFDM--- 458
                                                  .|:....||.:.|.|:|:||:..:   
 Frog   708 MDKKWTRCIFSLTERELRCYLAKNSEKVLHNIFGIEMVRDILPDASLGSPSCFKLVTSKGSLQLQ 772

  Fly   459 ------------------VELQQMVAQLCQLA---------------------REPGLDAQGFLC 484
                              :||...:|.|...|                     .|.|||:|.|.|
 Frog   773 AESSSEAKHWREMVRDVYLELADELALLAGTASFPIKSHIRGHALFQYLLYIPSEKGLDSQNFKC 837

  Fly   485 KSCQHPLGIGYSNFQVCAFSGSYYCNSCMDVEMQLIPARIIYNWDFRKYSVSKRAATFLAEFRSH 549
            .:|...:|..:...:.||:|..|||..|...|..:||:|:::|||..:.:||:.|..||....:.
 Frog   838 AACHKQIGFQFGKAKHCAYSALYYCEWCHQDEGSVIPSRMVHNWDLTEQAVSRPALKFLNMVLNE 902

  Fly   550 PFLDMQLLNPRIYFASDAMAELQSLRIRLNFIRAYLYTCAPSSIELLQNQFAGREYLYEHIHLYS 614
            |.:::..:|..:|..|..|..:...|.:|..:..||.||...:.:.|......|.||.:..|.||
 Frog   903 PIINVPSVNSGLYQHSHTMHNISHSREKLRLLAEYLQTCRSGAFQELSKSLDNRTYLLDCAHTYS 967

  Fly   615 IADLALIQRGVLCQQLQKAFKLGEAHVLKCRLCHLKGFICEICQSPRVLYPFHISTTFRCLACGA 679
            :.|...|..|.....|..|..|...||..|.||..|||||:||....::|||...||.||..|.:
 Frog   968 VQDFRQIANGEFELFLGAAVDLATKHVYDCDLCSQKGFICQICNQDEIIYPFQFETTTRCGDCKS 1032

  Fly   680 VFHAECLNEKQPCPKCERIRKREDQGL 706
            |||..|..|.:.||:|.|.:|.:.||:
 Frog  1033 VFHIPCKAEVKQCPRCLRRKKYQVQGV 1059

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Plekhm1NP_611639.1 RUN 54..185 CDD:280855 42/141 (30%)
zf-RING_9 500..700 CDD:290612 72/199 (36%)
plekhm1XP_002933223.2 RUN 51..183 CDD:397055 42/139 (30%)
PH_PLEKHM1 523..644 CDD:241475 9/120 (8%)
PH 699..789 CDD:214574 8/89 (9%)
zf-RING_9 853..1050 CDD:404739 71/196 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 186 1.000 Domainoid score I3295
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 283 1.000 Inparanoid score I2811
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D177737at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48070
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5810
SonicParanoid 1 1.000 - - X6907
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.000

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