DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCND3 and kcnd3

DIOPT Version :10

Sequence 1:NP_004971.2 Gene:KCND3 / 3752 HGNCID:6239 Length:655 Species:Homo sapiens
Sequence 2:XP_005167059.1 Gene:kcnd3 / 327415 ZFINID:ZDB-GENE-030131-5626 Length:650 Species:Danio rerio


Alignment Length:675 Identity:500/675 - (74%)
Similarity:573/675 - (84%) Gaps:45/675 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAAGVAAWLPFARAAAIGWMPVANCPMPLAPADKNKRQDELIVLNVSGRRFQTWRTTLERYPDTL 65
            ||||||||||||||||||||||||.|||:||::|||||||||:||||||||||||.||:||||||
Zfish     1 MAAGVAAWLPFARAAAIGWMPVANLPMPVAPSNKNKRQDELIILNVSGRRFQTWRNTLDRYPDTL 65

Human    66 LGSTEKEFFFNEDTKEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGD 130
            |||:||||||||:|:||||||||:|||.:|||||||||||||||||||||:||||:||:||||.|
Zfish    66 LGSSEKEFFFNEETREYFFDRDPDVFRSILNFYRTGKLHYPRYECISAYDEELAFFGIIPEIISD 130

Human   131 CCYEEYKDRKRENAERLMDDNDSENNQESMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAV 195
            |||||||||||||.||||||.: :|....:|:::||:|||||||||||||:|||||||||||||:
Zfish   131 CCYEEYKDRKRENTERLMDDLE-DNKDSKLPNMTFRETMWRAFENPHTSTMALVFYYVTGFFIAL 194

Human   196 SVITNVVETVPCGTVPGSKELPCGERYSVAFFCLDTACVMIFTVEYLLRLFAAPSRYRFIRSVMS 260
            |||||||||||||.:|..:::||||||:.||||:|||||||||||||:|||||||||||:|||||
Zfish   195 SVITNVVETVPCGYMPNQRDVPCGERYTEAFFCMDTACVMIFTVEYLMRLFAAPSRYRFMRSVMS 259

Human   261 IIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLL 325
            |||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   260 IIDVVAILPYYIGLVMTNNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLL 324

Human   326 FSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLS 390
            ||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||
Zfish   325 FSLTMAIIIFATVMFYAEKGSSSSKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLS 389

Human   391 GVLVIALPVPVIVSNFSRIYHQNQRADKRRAQK--KARLARIRVAKTGSSNAYLHSKRNGLLNEA 453
            |||||||||||||||||||||||||||||:|||  ||||||:|::|:|||.|:||||||| ||::
Zfish   390 GVLVIALPVPVIVSNFSRIYHQNQRADKRKAQKVQKARLARMRISKSGSSTAFLHSKRNG-LNQS 453

Human   454 LELTGTP-------------EEEHMGKTTSLIESQHHHLLHCLEKTTGLSYLVDDPLLSVRTSTI 505
            ||||..|             |::.:.|||||:|||||||||||||||                  
Zfish   454 LELTQLPYYKMKLSPQGSLEEDQQLKKTTSLLESQHHHLLHCLEKTT------------------ 500

Human   506 KNHEFIDEQMFEQNCMESSMQNYPSTRSPSLSSHPGLTTTCCSRRSKKTTHLPNSNLPATRLRSM 570
             ||||:||:::||..:::::||:|| :||||||..|:|.||||||.||.....|:....:...::
Zfish   501 -NHEFVDERLYEQGYLQTALQNFPS-QSPSLSSEEGITGTCCSRRPKKNIQPLNATHTHSHTHNL 563

Human   571 QELSTIHIQGSEQPSLTTSRSSLNLKADDGLRPNCKTS-QITTAIISIPTPPA----LTPEGESR 630
            ||||.:|||..||..|.||||||||.:|:....|||:| .:|||||||||||:    .:|:..|.
Zfish   564 QELSALHIQCGEQQPLNTSRSSLNLMSDESGSLNCKSSGLVTTAIISIPTPPSNNSRASPDAPSP 628

Human   631 PPPASPGPNTNIPSIASNVVKVSAL 655
            |.|.:| |..| || :::|||:|||
Zfish   629 PNPEAP-PLLN-PS-STDVVKISAL 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCND3NP_004971.2 BTB_POZ_KCND3 6..143 CDD:349726 119/136 (88%)
Interaction with KCNIP1 and KCNIP2. /evidence=ECO:0000269|PubMed:17187064, ECO:0000269|PubMed:34997220 6..21 14/14 (100%)
Interaction with KCNIP1. /evidence=ECO:0000269|PubMed:17187064 70..78 7/7 (100%)
Ion_trans 186..412 CDD:459842 210/225 (93%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 367..372 4/4 (100%)
DUF3399 468..563 CDD:463381 48/94 (51%)
Interaction with KCNIP1 and KCNIP2. /evidence=ECO:0000269|PubMed:34997220 470..487 15/16 (94%)
Mediates dendritic targeting. /evidence=ECO:0000250|UniProtKB:Q63881 472..487 13/14 (93%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 525..565 21/39 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 615..655 20/43 (47%)
kcnd3XP_005167059.1 BTB_POZ_KCND3 6..143 CDD:349726 119/136 (88%)
Ion_trans 181..411 CDD:459842 214/229 (93%)
DUF3399 481..556 CDD:463381 48/94 (51%)

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