DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13502 and Tmtc4

DIOPT Version :10

Sequence 1:NP_611637.1 Gene:CG13502 / 37518 FlyBaseID:FBgn0034692 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_650451.1 Gene:Tmtc4 / 41867 FlyBaseID:FBgn0038324 Length:705 Species:Drosophila melanogaster


Alignment Length:110 Identity:30/110 - (27%)
Similarity:48/110 - (43%) Gaps:17/110 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 AIHFFCKALELNSTDINALISRSKCYLLLGEASKALQD-----AETALGEDKNNIRAIYQKAESL 239
            |:|.:..|:.||.....|..:     :|....:|.|||     :..||....|::..::.:|..|
  Fly   565 ALHHWQHAVALNPRQPKAWAN-----ILTMLDNKGLQDDALRISNQALQHLPNDVSILFIRANVL 624

  Fly   240 YYLGQFEQSLMFFHRGLRARPELALF--RLGV-----QKTQEAIE 277
            ..|..:.::...:.|.:...|...|:  .|||     .|||||||
  Fly   625 GKLKHYTEAEAIYKRVIELEPHNTLYHTNLGVLYHRWDKTQEAIE 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13502NP_611637.1 TPR 150..>277 CDD:440225 28/108 (26%)
TPR repeat 165..189 CDD:276809 3/8 (38%)
TPR repeat 194..224 CDD:276809 8/34 (24%)
TPR repeat 229..257 CDD:276809 4/27 (15%)
Tmtc4NP_650451.1 TMTC_DUF1736 258..331 CDD:462468
LapB 431..675 CDD:442196 30/110 (27%)
TPR repeat 444..472 CDD:276809
TPR repeat 480..506 CDD:276809
TPR repeat 511..541 CDD:276809
TPR repeat 546..574 CDD:276809 3/8 (38%)
TPR repeat 580..608 CDD:276809 7/32 (22%)
TPR repeat 614..642 CDD:276809 4/27 (15%)
TPR repeat 647..677 CDD:276809 11/23 (48%)
Blue background indicates that the domain is not in the aligned region.

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