DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13502 and tmtc3

DIOPT Version :10

Sequence 1:NP_611637.1 Gene:CG13502 / 37518 FlyBaseID:FBgn0034692 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_001922486.5 Gene:tmtc3 / 100150181 ZFINID:ZDB-GENE-061221-2 Length:932 Species:Danio rerio


Alignment Length:253 Identity:55/253 - (21%)
Similarity:91/253 - (35%) Gaps:54/253 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 QGDDGGAGGGAGGDAAGGKRGNRIEAELRAARKKIEEQIAKKK---KPKENFVDFY--------- 121
            |.||.||....|.......|....|.....|:..:.:.|..||   :...|.::.|         
Zfish   476 QPDDIGAHMNVGRTYKNLNRSREAEEAYLIAKSLMPQIIPGKKYATRVAPNHLNVYINLANLIRA 540

  Fly   122 -------TDKDRAAAVSAGAFDIKQS--------LQIKQKQDRNEALLIPDEADISSV---IALG 168
                   .|:....|:|... |.||:        |::.:..:..:|.|...|.|.::.   ..|.
Zfish   541 NDSRLEEADQLYRQAISMRP-DFKQAYISRGELLLKMNKPSEAKDAYLRALELDHTNADLWYNLA 604

  Fly   169 LKEIKNANPENAIHFFCKALELNSTDINALISRSKCYLLLGEASKALQDAETALGEDKNNIRAIY 233
            :..|:..:|..|:..|.:||:||.....||.:.:   ||:.|:      .|..|..:.|.....|
Zfish   605 IVNIEMKDPSEALRNFNRALDLNPRHKLALFNSA---LLMQES------GEAKLRPEANRRFLTY 660

  Fly   234 QK-----AESLYYLGQF-------EQSLMFFHRGLRARP--ELALFRLGVQKTQEAIE 277
            .|     |...:.||..       |::..:....::.:|  ..|||.|.:..:|...|
Zfish   661 VKEEPDDANGYFNLGMLAMDANENEEAEHWMREAIQLQPGFRSALFNLALLYSQSQRE 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13502NP_611637.1 TPR 150..>277 CDD:440225 33/143 (23%)
TPR repeat 165..189 CDD:276809 6/23 (26%)
TPR repeat 194..224 CDD:276809 7/29 (24%)
TPR repeat 229..257 CDD:276809 6/39 (15%)
tmtc3XP_001922486.5 None

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