| Sequence 1: | NP_001246454.1 | Gene: | Synj / 37517 | FlyBaseID: | FBgn0034691 | Length: | 1218 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038944618.1 | Gene: | Synj1 / 85238 | RGDID: | 69434 | Length: | 1609 | Species: | Rattus norvegicus |
| Alignment Length: | 1446 | Identity: | 638/1446 - (44%) |
|---|---|---|---|
| Similarity: | 835/1446 - (57%) | Gaps: | 269/1446 - (18%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MAMSKVIRVLEKSIAPSPHSVLLEHRNKSDSILFESHAVALLTQQETDVIRKQYTKVCDAYGCLG 65
Fly 66 ALQLNAGESTVLFLVLVTGCVSMGKIGDIEIFRITQTTFVSLQNAAPNEDKISEVRKLLNSGTFY 130
Fly 131 FAHTNASASASGASSYRFDITLCAQRRQQTQETDNRFFWNRMMHIHLMRFGIDCQSWLLQAMCGS 195
Fly 196 VEVRTVYIGAKQARAAIISRLSCERAGTRFNVRGTNDEGYVANFVETEQVIYVDGDVTSYVQTRG 260
Fly 261 SVPLFWEQPGVQVGSHKVKLSRGFETSAAAFDRHMSMMRQRYGYQTVVNLLGSSLVGSKEGEAML 325
Fly 326 SNEFQRHHGMSAH-KDVPHVVFDYHQECRGGNFSALAKLKERIVACGANYGVFHASNGQVLREQF 389
Fly 390 GVVRTNCLDCLDRTNCVQTYLGLDTLGIQLEALKMGGKQQNISRFEEIFRQMWINNGNEVSKIYA 454
Fly 455 GTGAIQG---GSKLMDGARSAARTIQNNLLDNSKQEAIDVLLVGSTLSSELADRARILLPSNMLH 516
Fly 517 --------APTTVLRELCKRYTEYVRPRMARVAVGTYNVNGGKHFRSIVFKD-SLADWLLDCHAL 572
Fly 573 ARSKALVDVNNPSENVDHPVDIYAIGFEEIVDLNASNIMAASTDNAKLWAEELQKTISRDNDYVL 637
Fly 638 LTYQQLVGVCLYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGACAIRFVLHGTSMCFVCAHFAA 702
Fly 703 GQSQVAERNADYAEITRKLAFPMGRTLKSHDWVFWCGDFNYRIDMEKDELKECVRNGDLSTVLEF 767
Fly 768 DQLRKEQEAGNVFGEFLEGEITFDPTYKYDLFSDDYDTSEKQRAPAWTDRVLWRRRK-------- 824
Fly 825 --ALAEGDFAASA-----WNPGKLIHYGRSELKQSDHRPVIAIIDAEIMEIDQQRRRAVFEQVIR 882
Fly 883 DLGPPDSTIVVHVLESSATGDEDGPTIYDENVMSALITELSKMGEVTLVRYVEDTMWVTFRDGES 947
Fly 948 ALNASSKKSIQVCGLDLILELKSKDWQHLVDSEIEL---------CTTNTI-------------- 989
Fly 990 ----------------------------------------------------------------- 989
Fly 990 -------PLCANPVEHAQLLQAITPEL--PQRPKQPPTR--PPARPP------------------ 1025
Fly 1026 --------------MPMSP---------KNSPRHLPHVGVISIVPKP-----AKPPMP------- 1055
Fly 1056 --------------PQPQSQPL--------IPSPLQPQVAPPRPPAMDTTPSSKSQSPTELVSAS 1098
Fly 1099 SSTSSSGKTSPTAPAV----LSGPPTPPRQMQSKQATPV-STPTRQV------GSPKDPIPSDTA 1152
Fly 1153 YETASNIYEEIQEDVPAPRHPPPAGPPP--VIGAPMGPPPPLPNRRG------PPPIPNRS---- 1205
Fly 1206 ---GNAPPLPTRPANN 1218 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Synj | NP_001246454.1 | Syja_N | 61..353 | CDD:280532 | 177/292 (61%) |
| INPP5c_Synj | 538..863 | CDD:197323 | 211/340 (62%) | ||
| DUF1866 | 862..1008 | CDD:286093 | 50/240 (21%) | ||
| Synj1 | XP_038944618.1 | COG5329 | 100..523 | CDD:227637 | 255/435 (59%) |
| INPP5c_Synj1 | 576..911 | CDD:197332 | 211/340 (62%) | ||
| RRM_SF | 910..1052 | CDD:418427 | 46/146 (32%) | ||
| PHA03247 | <1097..1498 | CDD:223021 | 80/365 (22%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166339861 | |
| Domainoid | 1 | 1.000 | 407 | 1.000 | Domainoid score | I690 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H48252 | |
| Inparanoid | 1 | 1.050 | 1104 | 1.000 | Inparanoid score | I216 |
| OMA | 1 | 1.010 | - | - | QHG48338 | |
| OrthoDB | 1 | 1.010 | - | - | D359616at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002172 | |
| OrthoInspector | 1 | 1.000 | - | - | otm45958 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101787 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR11200 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1883 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 14 | 13.910 | |||||