DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Synj and SAC8

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_190751.2 Gene:SAC8 / 824346 AraportID:AT3G51830 Length:588 Species:Arabidopsis thaliana


Alignment Length:495 Identity:157/495 - (31%)
Similarity:236/495 - (47%) Gaps:84/495 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 TKVCDAYGCLGALQLNAGESTVLFLVLVTGCVSMGKIGDIEIFRITQTTFVSLQNA---APNEDK 116
            |:|...||..|.::|.||    .:|:::|....:|....:.|||:|...|:....|   |..::|
plant    59 TRVSTIYGVGGTIRLLAG----TYLLVITSREEVGNFLGLPIFRVTAMKFLPCNEALRFATAQEK 119

  Fly   117 ISEV--RKLLNS-----GTFYFAHTNASASASGASSYRFDITLCAQRRQQTQE----------TD 164
            ..|.  |.||.:     |.::              ||..|:||..|||.:..|          .|
plant   120 KDETYFRTLLQALETTPGLYF--------------SYETDLTLNLQRRCKLAEGWNRKPMWKQAD 170

  Fly   165 NRFFWNRMMHIHLMRFGIDCQ--SWLLQAMCGSVEVRTVYIGAKQARAAIISRLSCERAGTRFNV 227
            .|:.||    .||:...|:|:  .:::..:.||.:|..:.:....|..:|:||....|.|||...
plant   171 PRYVWN----WHLLEDLIECKLDGFIIPILQGSYQVAELKLKNSPAVVSIMSRRCTRRLGTRMWR 231

  Fly   228 RGTNDEGYVANFVETEQVIYVDGDVTSYVQTRGSVPLFWEQ-------PGVQVGSHKVKLSRGFE 285
            ||.|.||..|||||:||::.::|...|.:|.|||:||.|||       |.:::..|        |
plant   232 RGANLEGDAANFVESEQIVEINGFKFSLLQVRGSIPLLWEQIVDLSYKPRLKINKH--------E 288

  Fly   286 TSAAAFDRHMSMMRQRYGYQTVVNLLGSSLVGSKEGEAMLSNEFQRHHGMSAHKDVPHVVFDYHQ 350
            .:.....||...:.||||     .::...|......|..||..:...  |....||.:|.||:||
plant   289 ETPKVVQRHFHDLCQRYG-----EIMAVDLTDQHGDEGALSKAYATE--MEKLPDVRYVSFDFHQ 346

  Fly   351 ECRGGNFSALAKLKERIVACGANYGVFHA-SNGQVLREQFGVVRTNCLDCLDRTNCVQTYLGLDT 414
            .|...||..|..|.|:|.......|.|.. ::..:|.||.||:|:||:|||||||..|:::|..:
plant   347 VCGTTNFDNLGVLYEQIGDEFEKQGYFLVDADENILEEQKGVIRSNCIDCLDRTNVTQSFMGQKS 411

  Fly   415 LGIQLEALKMGGKQQNISRFEE---IFRQMWINNGNEVSKIYAGTGAIQG-----GSKLM----- 466
            |.:||:.:.:....:.||.||:   .||.:|...|:|||..||||.|::|     |.:.|     
plant   412 LNLQLQRIGVCDSTECISTFEDDYTKFRTIWAEQGDEVSLQYAGTYALKGDLVRYGKQTMTGAIK 476

  Fly   467 DGARSAARTIQNNLLDNSKQEAIDVL----LVGSTLSSEL 502
            ||..:.:|...||..|..:|:|:|::    .||:...|:|
plant   477 DGLSAMSRYYLNNFQDGVRQDALDLISGRYTVGTHSPSQL 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532 94/320 (29%)
INPP5c_Synj 538..863 CDD:197323
DUF1866 862..1008 CDD:286093
SAC8NP_190751.2 Syja_N 65..348 CDD:280532 94/319 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D359616at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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