DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Synj and AT3G14205

DIOPT Version :10

Sequence 1:NP_569729.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_566481.1 Gene:AT3G14205 / 820638 AraportID:AT3G14205 Length:808 Species:Arabidopsis thaliana


Alignment Length:696 Identity:147/696 - (21%)
Similarity:265/696 - (38%) Gaps:190/696 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VCDAYGCLGALQLNAGESTVLFLVLVTGCVSMGKIGDIEIFRITQTTFVS------LQNAAPNED 115
            |...||.:|.::...    ..:::::|....:|:|....::.:.::..::      |.|.|.::|
plant    90 VTTCYGIIGFIRFLG----PYYMLIITKRKKLGEICGHTVYGVAKSKIITIPHASVLSNVAYSKD 150

  Fly   116 K---------ISEVRKLLNSGTFYFAHT---NASASASGASSYRFDITLCAQRRQQTQETDNRFF 168
            :         :...:....|.:::..||   |.|.:..|.:.|                 ::.|.
plant   151 EKRYKRLLCTVDLTKDFFFSYSYHIMHTLQRNLSNNVEGHTYY-----------------ESMFV 198

  Fly   169 WNRMMHIHLMRFGIDCQSWLLQAMCGSVEVRTVYIGAKQARAAIISRLSCERAGTRFNVRGTNDE 233
            ||..:...:.....||. |.:..:.|..:...:.:..|..|..:|||.|...||||:..||.|::
plant   199 WNEYLTRRIRNNVKDCM-WTVALVYGFFKQVKLSVSEKNFRLTLISRRSRHYAGTRYLKRGVNEK 262

  Fly   234 GYVANFVETEQVIYVD------GDVTSYVQTRGSVPLFWEQPGVQVGSHKVKLSRGFETSAAAFD 292
            |.|||.|||||:::.:      |.::|.||.|||:||||.|...::......:....:.:..|..
plant   263 GRVANDVETEQIVFEEAQDGNPGRISSVVQNRGSIPLFWSQETSRLNIKPDIILSPKDPNFEATR 327

  Fly   293 RHMSMMRQRYGYQTVVNLLGSSLVGSKE---GEAMLSNEFQR-----HHGMSAHKDVPHVVFDYH 349
            .|...:.:|||...::    .:|:.::|   .|.:|..||..     :.|:|....:..:.:|.|
plant   328 LHFENLGRRYGNPIII----LNLIKTREKRPRETILRAEFANAIRFINKGLSKEDRLRPLHWDLH 388

  Fly   350 QECRGGNFSALAKLKERIVACGANY-GVFH----------------------------------- 378
            :..|....:.||.| .|:.....|. .:|:                                   
plant   389 KHSRKKGTNVLAIL-GRLATYALNLTSIFYCQLTPDLRGEGFQNQNPSTLENDDGECSTYDPPSK 452

  Fly   379 --------ASNG------------QVLREQFGVVRTNCLDCLDRTNCVQTYLGLDTLGIQLEALK 423
                    ..||            :|...|.||:||||:|||||||..|...||...|.||.||.
plant   453 DETAPNLVVENGNDSKDAKEDQQKEVTMLQKGVLRTNCIDCLDRTNVAQYAYGLVAFGRQLHALG 517

  Fly   424 MGGKQQNI---SRFEEIFRQMWINNGNEVSKIYAGT-----------GAIQGGSKLMDGARSAAR 474
            : .:..||   :...|....::...|:.::..|.|:           |..:..::..:..|:..|
plant   518 L-TESTNIDLDNPLAEDLMGIYETMGDTLALQYGGSAAHNKIFCERRGQWRAATQSQEFFRTLQR 581

  Fly   475 TIQNNLLDNSKQEAIDVLLVGSTLSSELADRARILLPSNMLHAPTTVLRELCKRYTEYVRPRMAR 539
            ...|..:|..||:||:|.|                                     .|.:|:..:
plant   582 YYSNAYMDAEKQDAINVFL-------------------------------------GYFQPQSDK 609

  Fly   540 VAVGTYNVNGGKHFRSIVFKDSLADWLLDCHALARSKALVDVNNPSENVDHPVDIYAIG------ 598
            .|:  :.:...:|:.:..|   ||:.:.:.......::|.:.:..||:  .|..:..:|      
plant   610 PAL--WELGSDQHYNAARF---LANSVPETSRSTMKRSLSESSIISES--SPAALGPVGRHGLAE 667

  Fly   599 -FEEIVDLNASNIMAASTDNAKLWA---------EELQKTISRDND 634
             .||:..|:.|....::::.||:.|         |||......:||
plant   668 KDEEVKGLSDSAPEISTSETAKIAASLSAPPPILEELGLDDILEND 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_569729.1 COG5329 61..493 CDD:227637 121/533 (23%)
INPP5c_Synj 538..863 CDD:197323 22/113 (19%)
DUF1866 862..1008 CDD:286093
AT3G14205NP_566481.1 Syja_N 94..392 CDD:460545 73/323 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.