DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Synj and 5PTase12

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_001323432.1 Gene:5PTase12 / 818994 AraportID:AT2G43900 Length:1348 Species:Arabidopsis thaliana


Alignment Length:891 Identity:196/891 - (21%)
Similarity:332/891 - (37%) Gaps:254/891 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 SSYRFDITLCAQR---RQQTQETDNRFFWNRMMHIHLM-----RFGIDCQSWL-LQAMC--GSVE 197
            |||. |:..|::.   :..|.|:..:....|:...|:.     |.|||.::.: :...|  .|.|
plant   275 SSYG-DLWSCSEGGVIKIWTWESMEKSLSLRLEEKHMAALLVERSGIDLRAQVTVNGTCNISSSE 338

  Fly   198 VRTVYIGAKQAR--AAIISRLSCERAGTRFNVRGTNDEGYVANFVETEQVIYVDGDVTSYVQTRG 260
            |:.:.....:::  ||.:...|.....|:..::..|.||...|.|:                   
plant   339 VKCLLADNVRSKVWAAQLQTFSLWDGRTKELLKVFNSEGQTENRVD------------------- 384

  Fly   261 SVPLFWEQPGVQVGSHKVKLSRGFETSAAAFDRHMSMMRQRYGYQTVVNLLGSSLVGSKEGEAML 325
             :||..:||..: ...|.|::    :::.....|..:.|.|           ::::|:.:....:
plant   385 -MPLGQDQPAAE-DEMKAKIA----STSKKEKPHGFLQRSR-----------NAIMGAADAVRRV 432

  Fly   326 SNEFQRHHGMSAHKDVPHVVFDYHQECRGGNFSALAKLKERIVACGANYGVFHASNGQVLREQFG 390
            :.                         |||.....||..|.:|..|.                 |
plant   433 AT-------------------------RGGGAYEDAKRTEAMVLAGD-----------------G 455

  Fly   391 VVRTNCLDCLDRTNCVQTYLGLDTLGIQLEALKMGGKQQNISRFEEIFRQMWINNGNEV------ 449
            ::.|.|                 |.|:.::                     |..|||.:      
plant   456 MIWTGC-----------------TNGLLIQ---------------------WDGNGNRLQDFRHH 482

  Fly   450 -----------SKIYAGTGAIQGGSKLMD--GARSAARTIQNNLLDNSKQEAIDVLLVGSTLSSE 501
                       .:||  .|.:.|..:::|  |...|.....||.:  .|..|.|..:.  :|::.
plant   483 QCAVLCFCTFGERIY--IGYVSGHIQIIDLEGNLIAGWVAHNNAV--IKMAAADGYIF--SLATH 541

  Fly   502 LADRARILLPSNMLHAPTTVLR-ELCKRYTEYVRPRMARVAVGTYNVNGGKHFRSIVFKDSLADW 565
            ...|...::....|..   ::| ||.::...|.:....|:..|::||..||     ...|:|..|
plant   542 GGIRGWPVISPGPLDG---IIRSELAEKERTYAQTDSVRILTGSWNVGQGK-----ASHDALMSW 598

  Fly   566 LLDCHALARSKALVDVNNPSENVDHPVDIYAIGFEEIVDLNASNI-MAASTDN---------AKL 620
            |                   .:|...|.|..:|.:| |::.|..: |:|:.::         .:.
plant   599 L-------------------GSVASDVGILVVGLQE-VEMGAGFLAMSAAKESVGGNEGSTIGQY 643

  Fly   621 WAEELQKTISRDNDYVLLTYQQLVGVCLYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGACAIR 685
            |.:.:.||:.....:..:..:||.|:.:.:::|.....|:.|:.:..|..|.|.|.||||...:|
plant   644 WIDTIGKTLDEKAVFERMGSRQLAGLLISLWVRKNLRTHVGDIDVAAVPCGFGRAIGNKGGVGLR 708

  Fly   686 FVLHGTSMCFVCAHFAAGQSQVAERNADYAEITRKLAF----------PMGRTLKSH-------- 732
            ..:....|||:..|.||....|..||||:..|.:.::|          ..|.:..||        
plant   709 IRVFDRIMCFINCHLAAHLEAVNRRNADFDHIYKTMSFTRSSNAHNAPAAGVSTGSHTTKSANNA 773

  Fly   733 --------------DWVFWCGDFNYRI-DMEKDELKECVRNGDLSTVLEFDQLRKEQEAGNVFGE 782
                          |.|.:.||||||: .:..||.::.|.......:.|.||||.|.:||.||..
plant   774 NVNTEETKQDLAEADMVVFFGDFNYRLFGISYDEARDFVSQRSFDWLREKDQLRAEMKAGRVFQG 838

  Fly   783 FLEGEITFDPTYKYDLFS---DDYDTSEKQRAPAWTDRVLWRRRKALAEGDFAASAWNPGKLIHY 844
            ..|..|||.||||::...   ..||:.||:|.|||.|||::|..:...|.:.:........::.|
plant   839 MREAIITFPPTYKFERHRPGLGGYDSGEKKRIPAWCDRVIFRDTRTSPESECSLDCPVVASIMLY 903

  Fly   845 GR-SELKQSDHRPVIAIIDAEIMEIDQQRRRAVFEQVIR----------DLGPPDSTIVVHVLES 898
            .. .::.:|||:||......:|..:|:..||..|.::|:          ||.....|||..  .|
plant   904 DACMDVTESDHKPVRCKFHVKIEHVDRSVRRQEFGRIIKTNEKVRALLNDLRYVPETIVSS--NS 966

  Fly   899 SATGDEDGPTI------YDENVMSALITELSKMGEVTLVRYVEDTM 938
            ....::|...:      ..||.:..::.|    |:.| ||..|||:
plant   967 IVLQNQDTFVLRITNKCVKENAVFRILCE----GQST-VREDEDTL 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532 36/221 (16%)
INPP5c_Synj 538..863 CDD:197323 101/371 (27%)
DUF1866 862..1008 CDD:286093 23/93 (25%)
5PTase12NP_001323432.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.