DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and AT2G37440

DIOPT Version :10

Sequence 1:NP_569729.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_181280.3 Gene:AT2G37440 / 818321 AraportID:AT2G37440 Length:479 Species:Arabidopsis thaliana


Alignment Length:388 Identity:127/388 - (32%)
Similarity:182/388 - (46%) Gaps:92/388 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   539 RVAVGTYNVNGGKHFRSIVFKDSLADWLLDCHALARSKALVDVNNPSENVDHPVDIYAIGFEEIV 603
            ::.|||:||.|......:    .|.|||               .:|::     .|||.:||:|||
plant    84 KMFVGTWNVGGKSPHEGL----DLKDWL---------------KSPAD-----ADIYVLGFQEIV 124

  Fly   604 DLNASNIMAASTDN--AKLWAEELQKTISRDND-------------------------------- 634
            .|||.|::.|. ||  |..|...:::.::..|:                                
plant   125 PLNAGNVLGAE-DNGPAAKWLSLIREALNNTNNLSPNELEHTKSSQQPRFSFSGLSDDTPIPCNS 188

  Fly   635 -----YVLLTYQQLVGVCLYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGACAIRFVLHGTSMC 694
                 |.|...:|:||:.|.:::|.:....|.::.:.||..|:.|..||||:.:|...||.||:|
plant   189 TPPRGYSLAASKQMVGIFLCVWVRDDLRKRITNLKVSCVGRGIMGYLGNKGSVSISMSLHETSLC 253

  Fly   695 FVCAHFAAGQSQVAE--RNADYAEITRKLAFPMG------RTLKSHDWVFWCGDFNYRIDMEKDE 751
            |||.|..:|:.:..|  ||.|..||.::..|...      .|:..||.|.|.||.|||:....| 
plant   254 FVCTHLTSGEKEGDELRRNLDVTEIFKRTRFSRSSKDSRPETIMDHDKVIWLGDLNYRLRASSD- 317

  Fly   752 LKECVRNGDLSTVLEFDQLRKEQEAGNVFGEFLEGEITFDPTYKYDLFSDDY-----DTSEKQRA 811
            |.|.:||.|..::||.|||:.||.||.:|..:.||:|.|.|||||.:.||:|     .:.||:|.
plant   318 LHEQLRNHDWESLLEKDQLKIEQRAGRIFKGWEEGKIYFAPTYKYRINSDNYVVQTEKSKEKRRT 382

  Fly   812 PAWTDRVLWRRRKALAEGDFAASAWNPGKLIHYGRSELKQSDHRPVIAIIDAEIMEIDQQRRR 874
            |||.||:||:       ||.....|       |.|.|.|.||||||.::....|...:|..|:
plant   383 PAWCDRILWK-------GDGMKQLW-------YVRGESKFSDHRPVQSLFSVHIDLKNQSNRK 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_569729.1 COG5329 61..493 CDD:227637
INPP5c_Synj 538..863 CDD:197323 124/375 (33%)
DUF1866 862..1008 CDD:286093 3/13 (23%)
AT2G37440NP_181280.3 EEP 6..424 CDD:469791 125/379 (33%)
Blue background indicates that the domain is not in the aligned region.

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