DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Synj and inpp5d

DIOPT Version :10

Sequence 1:NP_569729.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_021329769.1 Gene:inpp5d / 559103 ZFINID:ZDB-GENE-100922-30 Length:1108 Species:Danio rerio


Alignment Length:1035 Identity:222/1035 - (21%)
Similarity:358/1035 - (34%) Gaps:351/1035 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 SAHKDVPHVVFDYHQECRGGN---------FSALAKLKERIVACGANYGVFHASNGQVLREQFG- 390
            :.::.:||........|:..|         |.||.|:.::.::.||..          ||.|.. 
Zfish   196 NGNQTLPHFKKLTQNICKNLNSEIARTLPSFEALQKVLDQPLSPGAGR----------LRTQLSA 250

  Fly   391 ------VVRTNCLDCL-----DRT-NCVQTYLGLDTLGIQLEALKMGGKQQNI---SRFEEIFRQ 440
                  ..|...|..|     |:| |.|..::|.|           ||.:.::   ..||.....
Zfish   251 DANPSVAFRLEQLTKLIQSIEDKTKNAVFEFVGYD-----------GGHRNSLIPPVTFEVKSDS 304

  Fly   441 MWINNGNEVSKIYAGTGAIQGG----SKLMDGARSAARTIQNNLLDNSKQEAID--VLLVGSTLS 499
            :.|:|     |:|.... ::||    .|..||... ...:.|.:|...|.:.:.  ::||..|..
Zfish   305 LGISN-----KMYLKVD-VEGGKVYFKKSKDGPED-KYFVHNKILQLVKSQKMHNRLVLVVETEK 362

  Fly   500 SELADRARILLPSNMLHAPTTVLRELCKRYTEYVRPRMARVAVGTYNVNGGKHFRSIVFKDSLAD 564
            .:...:..:...:........:|:::..:::....|.|..:.|||:|:.....      ..::..
Zfish   363 GKTQSKDFVFDDTKKREGFCQLLQQMKNKHSGKPEPDMITIFVGTWNMGNANP------PQNITS 421

  Fly   565 WLLDCHALARSKALVDVNNPSENVDHPVDIYAIGFEEIVDLNASNIMAASTDNAKLWAEELQKTI 629
            |.       :||.....::.:.| ..|.|||.||.:|            .....|.|.|.::..:
Zfish   422 WF-------QSKGQGKTHDDTAN-QIPHDIYVIGTQE------------DPLGEKEWIETIRGAL 466

  Fly   630 SRDNDYVLLTYQQLV-----GVCLYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGACAIRFVLH 689
               .|...::::|:.     .:.:.:..:|||......:..|.||||:..|.|||||..:.|:.:
Zfish   467 ---RDITNISFKQIATQTLWSIRIVVLAKPEHENRFSHIFSDSVKTGIANALGNKGAVGVSFMFN 528

  Fly   690 GTSMCFVCAHFAAGQSQVAERNADYAEITR------KLAFPMGRTLK-SHDWVFWCGDFNYRIDM 747
            .||..||.:|..:|..:...||.:|..|.|      |...|...|.: :|  :||.||.|||:|:
Zfish   529 RTSFGFVNSHLTSGSEKKLRRNQNYVSILRFLNLGDKKVNPFDITHRFTH--LFWLGDLNYRVDL 591

  Fly   748 EKDELKECV---RNGDLSTVLEFDQLRKEQEAGNVFGEFLEGEITFDPTYKYD-------LFSDD 802
            ...|.:..|   :......:|..|||:.|::...||.|::|.||||.|||:::       .::..
Zfish   592 PSHEAENIVMKIKQQQYKELLAQDQLKIEKDEEKVFLEYVEEEITFAPTYRFERDTRERYAYTKA 656

  Fly   803 YDTSEKQRAPAWTDRVLWRRRKALAEGDFAASAWNPGKLIH-----YG-RSELKQSDHRPVIAII 861
            ..|..|...|:|.||||   ||:.             .|:|     || .:::..|||.||.|..
Zfish   657 KATGTKYNLPSWCDRVL---RKSY-------------PLVHVVCNSYGCTNDIMTSDHSPVFATF 705

  Fly   862 DAEIM-------EIDQQRRRAV-------------------------FEQVIR------------ 882
            |..:.       ::....|.|:                         .|:.:|            
Zfish   706 DVGVTSQFVSKNDLSNDARGAIKILNCVAVLCTKSKTKFFIEYHSSCLEKFVRSPDGENQEMEGS 770

  Fly   883 ---------DLGP----PDSTIVVHVLESSATGDEDGPTIYDENVMS-----ALITELSKMGEVT 929
                     :|.|    |:..:..|:|....:.|.|  ..|.|..::     :..||.|    :|
Zfish   771 IKVRFAGQVELTPIIADPEYLLDQHILICIKSTDSD--ESYGEGCVALRSAESSYTEFS----IT 829

  Fly   930 LVRYVEDTMWVT------------------------------FRDGESALNASS----------- 953
            |..:.|.|.|:|                              .:.|::...:||           
Zfish   830 LTHHGERTGWLTGAIQLPKSEGKQTEKLYDFIKVGDDPGAGKGKTGDNTKMSSSVLASDISNPSY 894

  Fly   954 -----KKSIQVCG----------LDLI---LELKSKDWQHLVDSEIELCTTNTIPLCANPVEHAQ 1000
                 |..||..|          .|:.   :..|...:.|...|.... |:|.||:...|     
Zfish   895 MGVGYKSGIQAPGSLTSQRTGPSKDMTHGNISPKKTSYDHATSSPTAK-TSNPIPVDGQP----- 953

  Fly  1001 LLQAITPELPQRPKQPPTRPPARPPMPMS-PKNSPRHLPHVGVISIVPKPA------KPPMP--- 1055
                  ||:...|...          .|| .:.:..|.|....:...|||.      :||:|   
Zfish   954 ------PEMFDNPLYG----------SMSGSRGAKEHHPPPDALFAFPKPTDFDSDRQPPVPTPR 1002

  Fly  1056 ----------PQ-------------PQS---QPLIPSPLQ-PQVAPPRPPAMDTTPSSKSQSPTE 1093
                      ||             |||   :|::||..: ..:.|.|||.           |.:
Zfish  1003 LRSYTCSETKPQSSSSTNLNMSSLLPQSITKKPVVPSRSEGGMIGPNRPPV-----------PMK 1056

  Fly  1094 LVSASSSTSSSGKTSPTAPAVLSGPPTPPRQMQSKQATP--VSTPTRQVGSPKDPIPSDT 1151
                    |.||:|..        |.|.||..:.....|  :..||| .|..|| :.|:|
Zfish  1057 --------SRSGQTQE--------PQTKPRDYRDSSELPSKIRPPTR-AGQTKD-VHSET 1098

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_569729.1 COG5329 61..493 CDD:227637 38/187 (20%)
INPP5c_Synj 538..863 CDD:197323 96/352 (27%)
DUF1866 862..1008 CDD:286093 39/266 (15%)
inpp5dXP_021329769.1 SH2_SHIP 3..105 CDD:198206
EEP 401..707 CDD:469791 96/352 (27%)
PHA03378 <935..>1088 CDD:223065 44/202 (22%)
Blue background indicates that the domain is not in the aligned region.

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